Job Description P77721 Confidence 96.86% Date Thu Jan 5 12:32:05 GMT 2012 Rank 111 Aligned Residues 83 % Identity 14% Template c3ic7A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative transcriptional regulator; PDBTitle: crystal structure of putative transcriptional regulator of gntr family2 from bacteroides thetaiotaomicron Resolution 2.82 Å

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		8	.	10	.	.	.	.	.	.										.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.
Query Sequence		Q	A	I	K	Q	M	V	A	N	.	.	.	.	.	.	.	.	.	D	K	K	V	T	V	S	N	L	S	G	I	F	Q	V	T	E	E	T	I	R	R	D	L	E	K	L	E	D	E	G	F	L	T	R	T	Y	G	G	A	V	L	N	T	A	M	L	T	E	N	I	H	F	Y	K	R	A	S	S	F	Y	E
Query Conservation											.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	Q	I	A	D	R	I	C	D	D	I	L	L	G	Q	Y	E	E	E	G	R	I	P	S	V	R	E	Y	A	S	I	V	V	N	A	N	T	V	X	R	S	Y	E	Y	L	Q	S	Q	E	V	I	Y	N	K	R	G	I	G	F	F	V	A	S	G	A	K	X	L	I	H	S	L	R	K	E	Q	F	L	K	E
Template Known Secondary structure		T												T	T	S	S		B	T	S					T	T	T	T	T	T					S	G	G	G									T	T	T	S					T	T	T						T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		79	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	Q	L	I	A	R	K	A	L	P	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	V	G	S	F	F	R	Q	L	Y	T	L
Template Known Secondary structure			S										T
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions