Job Description P77721 Confidence 98.03% Date Thu Jan 5 12:32:05 GMT 2012 Rank 29 Aligned Residues 159 % Identity 17% Template c3ecsD_ PDB info PDB header:translation Chain: D: PDB Molecule:translation initiation factor eif-2b subunit PDBTitle: crystal structure of human eif2b alpha Resolution 2.65 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.								.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																												.															.										.	.	.	.	.	.	.
Query SS confidence																												.															.										.	.	.	.	.	.	.
Query Sequence		A	S	S	F	Y	E	E	K	Q	L	I	A	R	K	A	L	P	F	I	D	N	K	T	T	M	A	.	A	D	S	S	S	T	V	M	E	L	L	K	L	L	.	Q	D	R	S	G	L	T	L	L	.	.	.	.	.	.	.	T	N	S	A	E	A	I	H	V	L	A	Q	S	E	I	K	V	V	S	T	G	G
Query Conservation																												.															.										.	.	.	.	.	.	.
Alig confidence																												.															.										.	.	.	.	.	.	.																			.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		L	R	R	I	S	L	S	R	N	K	I	A	D	L	C	H	T	F	I	K	D	G	A	T	I	L	T	H	A	Y	S	R	V	V	L	R	V	L	E	A	A	V	A	A	K	K	R	F	S	V	Y	V	T	E	S	Q	P	D	L	S	G	K	K	X	A	K	A	L	C	H	L	N	V	P	V	T	.	.	.	.
Template Known Secondary structure																		T	T			T	T							S															T	T											T	T	T	T											T	T	T					.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.	.	.
Query Sequence		E	L	N	K	N	T	L	S	L	Q	G	R	I	T	K	E	I	I	R	R	Y	H	V	D	I	M	V	M	S	C	K	G	L	D	I	N	S	G	A	L	D	S	N	E	A	E	A	E	I	K	K	T	M	I	R	Q	A	T	E	V	A	L	L	V	D	H	S	K	F	D	R	K	A	.	.	.	.	.	.	.
Query Conservation																																																																											.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.													.																						.																															.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.													.																						.
Template Sequence		.	.	.	.	.	.	.	.	V	V	L	D	A	A	V	G	Y	I	X	E	.	K	A	D	L	V	I	V	G	A	E	G	V	V	E	N	G	G	I	I	N	K	.	I	G	T	N	Q	X	A	V	C	A	K	A	Q	N	K	P	F	Y	V	V	A	E	S	F	K	F	V	R	L	F	P	L	N	Q	Q	D	V
Template Known Secondary structure		.	.	.	.	.	.	.	.				G	G	G					G	G	.	G		S							S				T	T	S						.	T	T											T	T									G	G	G	B		S				S	S	G	G	G	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.													.																						.
Template SS confidence
										177	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
																				217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.			.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	V	Q	L	A	D	F	S	H	I	N	Y	I	I	T	D	K	S	P	.	.	G	A	E	W	I	A	F	C	K	D
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Conservation
Template Sequence		P	D	K	F	K	Y	K	A	D	G	Q	D	L	K	E	E	H	P	W	V	D	Y	T	A	P	S	L	I	T	L	L	F	T	D	L	G	V	L	T	P	S	A	V	S	D	E	L	I	K
Template Known Secondary structure							S	S					S							S						G	G	G		S					T	T					G	G	G
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions