Job Description P77721 Confidence 97.99% Date Thu Jan 5 12:32:05 GMT 2012 Rank 31 Aligned Residues 155 % Identity 19% Template c3a11D_ PDB info PDB header:isomerase Chain: D: PDB Molecule:translation initiation factor eif-2b, delta PDBTitle: crystal structure of ribose-1,5-bisphosphate isomerase from2 thermococcus kodakaraensis kod1 Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		F	Y	K	R	A	S	S	F	Y	E	E	K	Q	L	I	A	R	K	A	L	P	F	I	D	N	K	T	T	M	A	.	A	D	S	S	S	T	V	M	E	L	L	K	L	L	Q	D	R	S	G	L	T	L	L	T	N	S	A	E	A	I	H	V	L	A	Q	S	E	I	K	V	V	S	T	G	G	E	L	N	K
Query Conservation																																.
Alig confidence																																.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	K	E	F	I	H	N	S	E	K	A	L	E	R	I	G	E	F	G	A	K	R	I	E	D	G	D	V	I	M	T	H	C	H	S	K	A	A	I	S	V	M	K	T	A	W	E	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	D	I	K	V	I	V	T	E	T	R	P	K	W
Template Known Secondary structure											T											T	T			T	T							S															T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T											T	T	T	T
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.																		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.																		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	T	L	S	L	Q	G	R	I	T	K	E	I	I	R	R	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	V	D	I	M	V	M	S	C	K	G	L	D	I	N	S	G	A	L	D	S	N	E	A	E	A	E	I	K	K	T	M	I	R	Q	A	T	E	V	A	L	L	V	D	H	S
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation		.	.	.	.	.																																										.
Template Sequence		.	.	.	.	.	Q	G	K	I	T	A	K	E	L	A	S	Y	G	I	P	V	I	Y	V	V	D	S	A	A	R	H	Y	M	K	M	T	D	K	V	V	M	G	A	D	S	I	.	T	V	N	G	A	V	I	N	K	I	G	T	A	L	I	A	L	T	A	K	E	H	R	V	W	T	M	I	A	A	E	T	Y
Template Known Secondary structure		.	.	.	.	.												T	T								G	G	G	T	T	T	T	G	G	G		S							S			.		T	T							T	T											T	T									G	G
Template Predicted Secondary structure		.	.	.	.	.																																										.
Template SS confidence
							164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		211	.	.	.	.	.																																	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.			.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Query Sequence		K	F	D	R	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	V	Q	L	A	D	F	S	H	I	N	Y	I	I	T	D	K	S	P	.	.	G	A	E	W	I	A	F	C	K	D	N
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Conservation
Template Sequence		K	F	H	P	E	T	M	L	G	Q	L	V	E	M	R	D	P	T	E	V	I	P	E	D	E	L	K	T	W	P	K	N	I	E	V	W	N	P	A	F	D	V	T	P	P	E	Y	V	D	V	I	I	T	E	R	G	I	I	P	P	Y	A	A	I	D	I	L	R	E	E
Template Known Secondary structure		G	B		S	S			T	T	T	T			B			G	G	G	T	S						T	T	S		S	S						B	S						G	G	G		S					T	T					G	G	G
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions