Return to main results Retrieve Phyre Job Id

Job DescriptionP77721
Confidence87.01%DateThu Jan 5 12:32:05 GMT 2012
Rank346Aligned Residues50
% Identity18%Templatec2plyB_
PDB info PDB header:translation/rnaChain: B: PDB Molecule:selenocysteine-specific elongation factor; PDBTitle: structure of the mrna binding fragment of elongation factor2 selb in complex with secis rna.
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10........ .20.........30.........40.........50..
Predicted Secondary structure 

..






Query SS confidence 















. .

































Query Sequence  AKDRIQAIKQMVANDK. . KVTVSNLSGIFQVTEETIRRDLEKLEDEGFLTRT
Query Conservation    

   

  
    .. 
 
 


  
 

  





  

  
 
 
 
Alig confidence 















..

































Template Conservation         
       
  

   

     
        
  
   
 

 
Template Sequence  QKKLLKDLEDKYRVSRWQPPWVKEVAGSFNLDPSELEELLHYLVREGVLVKI
Template Known Secondary structure  TTS


TT

TSS
Template Predicted Secondary structure 













Template SS confidence 



















































   515....520.........530.........540.........550.........560......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions