Return to main results Retrieve Phyre Job Id

Job DescriptionP77721
Confidence88.80%DateThu Jan 5 12:32:05 GMT 2012
Rank323Aligned Residues49
% Identity18%Templatec2pjpA_
PDB info PDB header:translation/rnaChain: A: PDB Molecule:selenocysteine-specific elongation factor; PDBTitle: structure of the mrna-binding domain of elongation factor2 selb from e.coli in complex with secis rna
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50..
Predicted Secondary structure 








Query SS confidence 

















































Query Sequence  AKDRIQAIKQMVANDKKVTVSNLSGIFQVTEETIRRDLEKLEDEGFLTRT
Query Conservation    

   

  
     
 
 


  
 

  





  

  
 
 
 
Alig confidence 











.




































Template Conservation 

     
    .   

   

   
          
  
   
 



Template Sequence  QQAIWQKAEPLF. GDEPWWVRDLAKETGTDEQAMRLTLRQAAQQGIITAI
Template Known Secondary structure  GGG
.SSS
TT

TTS
Template Predicted Secondary structure  .











Template SS confidence 

















































   491........500.. .......510.........520.........530.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions