Return to main results Retrieve Phyre Job Id

Job DescriptionP77721
Confidence99.82%DateThu Jan 5 12:32:05 GMT 2012
Rank11Aligned Residues126
% Identity21%Templatec2pjmA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:ribose-5-phosphate isomerase a; PDBTitle: structure of ribose 5-phosphate isomerase a from2 methanocaldococcus jannaschii
Resolution1.78 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   75....80.........90.........100.........110.........120.........130.........140.........150....
Predicted Secondary structure 
























Query SS confidence 















































































Query Sequence  SFYEEKQLIARKALPFIDNKTTMAADSSSTVMELLKLLQDRSGLTLLTNSAEAIHVLAQSEIKVVSTGGELNKNTLSLQG
Query Conservation       
  

  
  

     



 


   
   
     







 

  
      
 
 

          
Alig confidence 






































...............

























Template Conservation 
  
 
  

  
   
 

  








   
  
 ...............       
 
  
  
  
   
   
Template Sequence  SNEDLKLKVAKEAVKLVKDGMVIGLGTGSTAALFIRELG. . . . . . . . . . . . . . . NRIREEELTVFGIPTSFEAKMLAMQY
Template Known Secondary structure 

GGG

TT


S...............T


SST
Template Predicted Secondary structure 









...............






Template SS confidence 















































































   2.......10.........20.........30.........40 .........50.........60......
 
   155....160.........170.........180.........190... ......200.........210.....
Predicted Secondary structure 
















.








Query SS confidence 






































.





















Query Sequence  RITKEIIRRYHVDIMVMSCKGLDINSGALDSNEAEAEIK. KTMIRQATEVALLVDHSKFDRK
Query Conservation    
   
     
 


   

    
       

  
.
  
  
   




 

    
Alig confidence 






































.





















Template Conservation 

 
  
    








 

      


 
 

 





  
   




 

 
  
Template Sequence  EIPLVTLDEYDVDIAFDGADEVEETTLFLIKGGGGCHTQEKIVDYNANEFVVLVDESKLVKK
Template Known Secondary structure  T

B

TTT


S

STTT



TTS
SSGGGSS
Template Predicted Secondary structure 























Template SS confidence 





























































   67..70.........80.........90.........100.........110.........120........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions