|   |
78 | . | 80 | . | . | . | . | . | . | . | . | |
. | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | |
|
|
|
|
|
. | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | . |  |  |
|
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . |
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | E | K | Q | L | I | A | R | K | A | L | . |
P | F | I | D | N | K | T | T | M | A | A | D | S | S | S | T | V | M | E | L | L | K | L | L | Q | D | R | . |
. |
. |
. |
. |
. |
S | G | L | T | L | L | T | N | S | A | E | A | I | H | V | L | A | Q | S | E | I | K | V | V | S | T | G | G | E | L | N | K | N | T | L |
Query Conservation |   |
  |   |
|   |   |
|
|   |   |
|   | . |   |
|
|   |   |   |   |   |
|
|
|
|   |
|
|
|   |   |   |
|   |   |   |
|   |   |   | . | . | . | . | . | . |   |   |
|
|
|
|
|
|
|
|   |
|
|   |   |
|   |   |   |   |   |   |
|   |
|   |
|
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |   |
|   |   |
|
|   |   |
|
|   |   |
|
|   |
|
|   |   |
|
|
|
|
|
|
|
|   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|
|   |
|   |   |
|   |   |   |
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Sequence |   |
S | L | K | K | I | V | A | Y | K | A | V | D | E | Y | V | Q | S | N | M | T | I | G | L | G | T | G | S | T | V | F | Y | V | L | E | R | I | D | N | L | L | K | S | G | K | L | K | D | V | V | C | I | P | T | S | I | D | T | E | L | K | A | R | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| T | T |
|  |  |  |  |
|
| S | T | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S | S |
| S |
|  |  |  |  | S | S |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |
  |   |
151 | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | L | Q | G | R | I | T | K | E | I | I | R | R | Y | H | V | D | I | M | V | M | S | C | K | G | L | D | I | N | S | G | A | L | D | S | N | E | A | E | A | E | I | K | K | T | M | I | R | Q | A | T | E | V | A | L | L | V | D | H | S | K | F | D | R | K | A | F | V | Q | L | A | D | F |
Query Conservation |   |
  |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |
|   |
|
|
|   |   |   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |
|   |   |
|   |   |   |
|
|
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
. | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . |   |
|
|   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|
|
|
|   |
|
|   |   |   |   |
|
|
|
|
|
|   |
|   |   |   |
|
|   |
|
|   |   |
|   |   |   |
|
|
|
|
|   |
|
|   |   |   |   |   |
|   |   |   |   |
|
|
Template Sequence |   |
. |
. |
L | G | I | P | L | T | T | L | E | K | H | S | N | I | D | I | T | I | D | G | T | D | E | I | D | L | N | L | N | L | I | K | G | R | G | G | A | L | V | R | E | K | L | V | A | S | S | S | S | L | L | I | I | I | G | D | E | S | K | L | C | T | N | G | L | G | M | T | G | A | V |
Template Known Secondary structure |   |
. | . |  | T |
|
| B |
|
|
|
| T | T |
|
| B | S |  |  |  |  |
|
| S |  |  |
| T | T |
|
|  |  |
|
| T | T | S |
|  |  |  |  |  |  |  |  |  | T | B | S |
|  |  |  |  |  |  | G | G | G | B |
|
| S |
| S | S |
| S | S |
|  |
Template Predicted Secondary structure |   |
. | . |
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
66 | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . |
  |