|   |
78 | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | |
. | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |  |
|
|  |  |
|
|
|
|
|  |  |  |
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | E | K | Q | L | I | A | R | K | A | L | P | F | I | D | N | K | T | T | M | A | A | D | S | S | S | T | V | M | E | L | L | K | L | L | Q | D | R | S | G | L | T | L | L | T | N | S | A | E | A | I | H | V | L | A | Q | . |
S | E | I | K | V | V | S | T | G | G | E | L | N | K | N | T | L | S | L | Q | G | R | I |
Query Conservation |   |
  |   |
|   |   |
|
|   |   |
|   |   |
|
|   |   |   |   |   |
|
|
|
|   |
|
|
|   |   |   |
|   |   |   |
|   |   |   |   |   |
|
|
|
|
|
|
|
|   |
|
|   |   |
|   |   | . |   |   |   |   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |
|
|   |   |
|   |   |   |
|   |
|
|   |   |
|
|
|
|
|
|
|
|
|   |   |   |
|   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |
|
|
Template Sequence |   |
S | Y | K | K | E | A | A | H | A | A | I | A | Y | V | Q | D | G | X | V | V | G | L | G | T | G | S | T | A | R | Y | A | V | L | E | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | R | R | L | R | E | G | E | L | K | G | V | V | G | V | P | T | S | R | A | T | E | E | L | A | K | R | E | G | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | T | T |
|
| T | T |
|  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  | T | T | S | S |
| S |
|  |  |  |  | S | S |  |  |  |  |  |  |  |  |  | T | T |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . |
  |
  |   |
157 | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | K | E | I | I | R | R | Y | H | V | D | I | M | V | M | S | C | K | G | L | D | I | N | S | G | A | L | D | S | N | E | A | E | A | E | I | K | K | T | M | I | R | Q | A | T | E | V | A | L | L | V | D | H | S | K | F |
Query Conservation |   |
|   |   |   |
|   |   |   |   |   |
|   |
|
|
|   |   |   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |
|   |   |
|   |   |   |
|
|
|
|
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|   |   |   |   |
|
|
|
|
|
|
|
|
|   |
|
|   |   |   |   |
|
|
|
|   |
|   |
|
|   |   |
|
|   |
|
|   |   |
|   |   |   |
|
|
|
|
|   |
|
|   |
Template Sequence |   |
P | L | V | D | L | P | P | E | G | V | D | L | A | I | D | G | A | D | E | I | A | P | G | L | A | L | I | K | G | X | G | G | A | L | L | R | E | K | I | V | E | R | V | A | K | E | F | I | V | I | A | D | H | T | K | K |
Template Known Secondary structure |   |
| B |
|
|
|
| T | T |
|  |  |  |  |  |  |
|
| S |  |  |  | G | G | G |  |  |  |
|
| T | T | S |
|  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  | G | G | G | B |
Template Predicted Secondary structure |   |
 |  |  |  |
|  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
72 | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . |
  |