Job Description P77721 Confidence 94.31% Date Thu Jan 5 12:32:05 GMT 2012 Rank 243 Aligned Residues 134 % Identity 16% Template c1o57A_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:pur operon repressor; PDBTitle: crystal structure of the purine operon repressor of2 bacillus subtilis Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.			.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40					.	.	.	.	.	.	.	.			.	50	.	.	.				.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.																									.	.	.	.									.	.						.	.	.
Query SS confidence																		.	.																									.	.	.	.									.	.						.	.	.
Query Sequence		M	A	A	K	D	R	I	Q	A	I	K	Q	M	V	A	N	.	.	D	K	K	V	T	V	S	N	L	S	G	I	F	Q	V	T	E	E	T	I	R	R	D	L	.	.	.	.	E	K	L	E	D	E	G	F	.	.	L	T	R	T	Y	.	.	.	G	G	A	V	L	N	T	A	M	L	T	E	N	I	H	F
Query Conservation																		.	.																									.	.	.	.									.	.						.	.	.
Alig confidence																		.	.																									.	.	.	.									.	.						.	.	.													.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		F	R	R	S	G	R	L	V	D	L	T	N	Y	L	L	T	H	P	H	E	L	I	P	L	T	F	F	S	E	R	Y	E	S	A	K	S	S	I	S	E	D	L	T	I	I	K	Q	T	F	E	Q	Q	G	I	G	T	L	L	T	V	P	G	A	A	G	G	V	K	Y	I	P	K	M	K	Q	A	.	.	.	.
Template Known Secondary structure																	T	S	T	T			B									T	T																				T	T	S								S	T	T													.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.									.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.				.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.																	.	.	.																	.
Query SS confidence																																		.	.	.	.	.	.	.	.																	.	.	.																	.
Query Sequence		Y	K	R	A	S	S	F	Y	E	E	K	Q	L	I	A	R	K	A	L	P	F	I	D	N	K	T	T	M	A	A	D	S	.	.	.	.	.	.	.	.	S	S	T	V	M	E	L	L	K	L	L	Q	D	R	S	G	.	.	.	L	T	L	L	T	N	S	A	E	A	I	H	V	L	A	Q	.	S	E	I	K
Query Conservation																																		.	.	.	.	.	.	.	.																	.	.	.																	.
Alig confidence		.																.	.															.	.	.	.	.	.	.	.																	.	.	.																	.
Template Conservation		.																.	.
Template Sequence		.	E	A	E	E	F	V	Q	T	L	G	Q	S	L	A	N	.	.	P	E	R	I	L	P	G	G	Y	V	Y	L	T	D	I	L	G	K	P	S	V	L	S	K	V	G	K	L	F	A	S	V	F	A	E	R	E	I	D	V	V	M	T	V	A	T	K	G	I	P	L	A	Y	A	A	A	S	Y	L	N	V	P
Template Known Secondary structure		.														T		.	.	G	G	G			T	T	T					T	T	T	T	T																T	T	T	S			S						T	T	T	T												T
Template Predicted Secondary structure		.																.	.
Template SS confidence
			79	80	.	.	.	.	.	.	.	.	.	90	.	.	.			.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		138	.	140	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	S	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	I	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions