Job Description P77181 Confidence 99.70% Date Thu Jan 5 12:26:03 GMT 2012 Rank 41 Aligned Residues 143 % Identity 20% Template d3tdta_ SCOP info Single-stranded left-handed beta-helix Trimeric LpxA-like enzymes Tetrahydrodipicolinate-N-succinlytransferase, THDP-succinlytransferase, DapD Resolution 2.00

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Y	Q	I	D	G	L	T	P	V	V	P	E	E	S	F	V	H	P	T	A	V	L	I	G	D	V	I	L	G	K	G	V	Y	V	G	P	N	A	S	L	R	G	D	F	G	R	I	V	V	K	D	G	A	N	I	Q	D	N	C	V	M	H	G	F	P	E	Q	D	T	V	V	G	E	D	G	H	I	G	H
Query Conservation
Alig confidence																																													.	.	.	.																	.	.	.	.
Template Conservation																																													.	.	.	.																	.	.	.	.
Template Sequence		K	F	A	D	Y	D	E	A	R	F	Q	K	E	G	F	R	V	V	P	P	A	T	V	R	Q	G	A	F	I	A	R	N	T	V	L	M	P	S	Y	V	N	I	G	.	.	.	.	A	Y	V	D	E	G	T	M	V	D	T	W	A	T	V	G	.	.	.	.	S	C	A	Q	I	G	K	N	V	H	L	S	G
Template Known Secondary structure		T	T	T	T															T	T				B	T	T					T	T					S					T	T	.	.	.	.					T	T					T	T					.	.	.	.	T	T					T	T					T
Template Predicted Secondary structure																																													.	.	.	.																	.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.					.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.					.	.	150	.	.	.	.	.	.	.	.	.	160
		83	.	.	.	.										.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.														.	.	.	130	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.
Query Sequence		S	A	I	L	H	.	.	.	.	.	.	.	.	.	G	C	I	I	R	R	N	A	L	V	G	M	N	A	V	V	M	D	G	A	V	I	G	E	N	S	I	V	G	A	S	A	F	V	K	A	K	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	M	P	A	N	Y	L	I	V	G	.	.	.	.	.
Query Conservation							.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.
Template Conservation
Template Sequence		G	V	G	I	G	G	V	L	E	P	L	Q	A	N	P	T	I	I	E	D	N	C	F	I	G	A	R	S	E	V	V	E	G	V	I	V	E	E	G	S	V	I	S	M	G	V	Y	L	G	Q	S	T	R	I	Y	D	R	E	T	G	E	I	H	Y	G	R	V	P	A	G	S	V	V	V	S	G	N	L	P	S
Template Known Secondary structure		T						S	B	T	T	B		S	S						T	T					T	T					T	T					T	T					T	T					T	T						T	T	T					S	S				T	T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
									136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	S	P	A	K	A	I	R	E	L	S	E	Q	E	L	A	W	K	K
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	D	G	S	Y	S	L	Y	C	A	V	I	V	K	K	V	D	A	K	T	R	G	K	V	G
Template Known Secondary structure		T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions