Job Description P77181 Confidence 99.28% Date Thu Jan 5 12:26:03 GMT 2012 Rank 49 Aligned Residues 136 % Identity 7% Template d2f9ca1 SCOP info Single-stranded left-handed beta-helix Trimeric LpxA-like enzymes YdcK-like Resolution 2.80

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.			.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure																																												.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	Q	I	D	G	L	T	P	V	V	P	E	E	S	F	V	H	P	T	A	V	L	I	G	D	V	I	L	G	K	G	V	Y	V	G	P	N	A	S	L	R	G	.	.	D	F	G	R	I	V	V	K	D	G	A	N	I	Q	D	N	C	V	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																												.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.																									.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.
Template Sequence		P	C	T	L	Y	N	N	V	R	I	G	D	N	V	W	I	D	.	R	A	D	I	S	D	G	A	R	I	S	D	N	V	T	I	Q	S	S	S	V	R	E	E	C	A	I	Y	G	D	A	R	V	L	N	Q	S	E	I	L	A	I	Q	G	L	T	H	E	H	A	Q	I	L	Q	I	Y	D	R	A	T	V	N
Template Known Secondary structure		S					S	S					S	S				S	.	S					S	S					S	S					S					S	S					S	S					S	S										S	S	S	T	T							S	S
Template Predicted Secondary structure																			.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
																									65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.						.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	G	F	P	E	Q	D	T	V	V	G	E	D	G	H	I	G	H	S	A	I	L	.	.	.	.	.	H	G	C	I	I	R	R	N	A	L	V	G	M	N	A	V	V	M	D	G	A	V	I	G	E	N	S	I	V	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.
Template Conservation
Template Sequence		H	S	R	I	V	H	Q	V	Q	L	Y	G	N	A	T	I	T	H	A	F	I	E	H	R	A	E	V	F	D	F	A	L	I	E	G	D	K	D	N	N	V	W	I	C	D	C	A	K	V	Y	G	H	A	R	V	I	A	G	T	E	E	D	A	I	P	T	L	R	Y	S	S	Q	V	A	E	H	A	L	I	E
Template Known Secondary structure		S					S	S					S	S					S					S	S					S	S							S	S							S	S					S	S							S	S	T	T							S	S					S	S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	A	F	V	K	A	K	A	E	M	P	A	N	Y	L	I	V	G	S	P	A	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	N	C	V	L	K	H	H	V	L	V	G	G	H	A	E	V	R	G	G	P	I	L	L
Template Known Secondary structure		S	S					T						S	S					S	S	S
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions