Job Description P77181 Confidence 99.95% Date Thu Jan 5 12:26:03 GMT 2012 Rank 10 Aligned Residues 166 % Identity 23% Template c2iu9C_ PDB info PDB header:transferase Chain: C: PDB Molecule:udp-3-o-[3-hydroxymyristoyl] glucosamine PDBTitle: chlamydia trachomatis lpxd with 100mm udpglcnac (complex ii) Resolution 3.1 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.																		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	I	D	G	L	T	P	V	V	P	E	E	S	F	V	H	P	T	A	V	L	I	G	D	V	I	L	G	K	G	V	Y	V	G	P	N	A	S	L	R	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	G	R	I	V	V	K	D	G	A	N	I	Q	D	N	C	V	M	H	G	F
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	V	I	G	A	Y	S	T	V	G	E	H	S	Y	I	H	P	R	V	V	I	R	E	R	V	S	I	G	K	R	V	I	I	Q	P	G	A	V	I	G	S	C	G	F	G	Y	V	T	S	A	F	G	Q	H	K	H	L	K	H	L	G	K	V	I	I	E	D	D	V	E	I	G	A	N	T	T	I	D	R	G
Template Known Secondary structure						T	T					T	T					S	S					S	S					T	T					T	T								S						S	S	S															T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.																				.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	E	Q	D	T	V	V	G	E	D	G	H	I	G	H	S	A	I	L	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	C	I	I	R	R	N	A	L	V	G	M	N	A	V	V	M	D	G	A	V	I	G	E	N	S	I	V	G	A	S	A	F	V	K	A	K	A	E	M	P
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.
Template Conservation																																																																												.	.
Template Sequence		R	F	K	H	S	V	V	R	E	G	S	K	I	D	N	L	V	Q	I	A	H	Q	V	E	V	G	Q	H	S	M	I	V	A	Q	A	G	I	A	G	S	T	K	I	G	N	H	V	I	I	G	G	Q	A	G	I	T	G	H	I	C	I	A	D	H	V	I	M	M	A	Q	T	G	V	T	.	.	K	S	I	T
Template Known Secondary structure		S	S	S						T	T					T	T					T	T					T	T					T	T					T	T					T	T					T	T					S	S					T	T					T	T					.	.	S		B
Template Predicted Secondary structure																																																																												.	.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300			.	.	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	Y	L	I	V	G	S	P	A	K	A	I	R	E	L	S	E	Q	E	L	A	W	K	K	Q	G	T	H	E	Y	Q	V	L	V	T	R	C	K	Q	T	L	H	Q	V	E	P	L	R
Query Conservation
Alig confidence																.	.	.	.	.
Template Conservation																.	.	.	.	.
Template Sequence		S	P	G	I	Y	G	G	A	P	A	R	P	Y	Q	.	.	.	.	.	E	I	H	R	Q	V	A	K	V	R	N	L	P	R	L	E	E	R	I	A	A	L	E	K	L	V	Q	K	L	E
Template Known Secondary structure		S						T	T	T	T					.	.	.	.	.										T	T												T	T	T	T
Template Predicted Secondary structure																.	.	.	.	.
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.						.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions