Job Description P77181 Confidence 99.32% Date Thu Jan 5 12:26:03 GMT 2012 Rank 48 Aligned Residues 128 % Identity 22% Template c2ggqA_ PDB info PDB header:transferase Chain: A: PDB Molecule:401aa long hypothetical glucose-1-phosphate PDBTitle: complex of hypothetical glucose-1-phosphate thymidylyltransferase from2 sulfolobus tokodaii Resolution 2.00 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.																																.	.	.	50	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	Q	I	D	G	L	T	P	V	V	P	E	E	S	F	V	H	P	T	A	V	L	I	G	D	V	I	L	G	K	G	V	Y	V	G	P	N	A	S	L	R	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	G	R	I	V	V
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	V	K	I	K	G	K	V	I	I	E	E	D	A	E	I	K	S	G	T	Y	I	E	G	P	V	Y	I	G	K	G	S	E	I	G	P	N	S	Y	L	R	P	Y	T	I	L	V	E	K	N	K	I	G	A	S	V	E	V	K	E	S	V	I	M	E	G	S	K	I	P	H	L	S	Y	V	G	D	S	V	I
Template Known Secondary structure		S					S						T	T					T	T					S	S					T	T					S	S					T	T					S	S											S					T	T											S
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		53	.	.	.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.																				.
Query SS confidence														.	.																				.
Query Sequence		K	D	G	A	N	I	Q	D	N	C	V	M	.	.	H	G	F	P	E	Q	D	T	V	V	G	E	D	G	H	I	G	H	S	.	A	I	L	H	G	C	I	I	R	R	N	A	L	V	G	M	N	A	V	V	M	D	G	A	V	I	G	E	N	S	I	V	G	A	S	A	F	V	K	A	K	A	E	M	P	A
Query Conservation														.	.																				.
Alig confidence														.	.																				.																																								.	.
Template Conservation																																																																											.	.
Template Sequence		A	E	D	V	N	F	G	A	G	T	L	I	A	N	L	R	F	D	E	K	E	V	K	V	N	V	K	G	K	R	I	S	S	G	R	R	K	L	G	A	F	I	G	G	H	V	R	T	G	I	N	V	T	I	L	P	G	V	K	I	G	A	Y	A	R	I	Y	P	G	A	V	V	N	.	.	R	D	V	G	Y
Template Known Secondary structure			T	T					T	T						S		T	T									T	T						S		S	S							T	T					T	T					T	T					T	T					T	T					.	.	S		B		T
Template Predicted Secondary structure																																																																											.	.
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390			.	.	.	.	.
		130	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Y	L	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	E	F	F
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		396	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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