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Job DescriptionP77181
Confidence99.80%DateThu Jan 5 12:26:03 GMT 2012
Rank34Aligned Residues140
% Identity15%Templatec1hm8A_
PDB info PDB header:transferaseChain: A: PDB Molecule:udp-n-acetylglucosamine-1-phosphate uridyltransferase; PDBTitle: crystal structure of s.pneumoniae n-acetylglucosamine-1-phosphate2 uridyltransferase, glmu, bound to acetyl coenzyme a
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40......
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Query Sequence  PIYQIDGLTPVVPEESFVHPTAVLIGDVILGKGVYVGPNASLRGD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  PEATYIDIDVEIAPEVQIEANVILKGQTKIGAETVLTNGTYVVDSTIGAGAVITNSMIEESSVADGVTVGPYAHIRPNSS
Template Known Secondary structure  GGG

TT

TT

SS
SS

TT

TT
S

TT

S
S

TT

SS

SS
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   257..260.........270.........280.........290.........300.........310.........320.........330......
 
   47..50.........60..... ....70.........80....... ..90.........100.........110.
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Query Sequence  . . . . . . . . . . . . FGRIVVKDGANIQDNCVMH. GFPEQDTVVGEDGHIGHSAILH. . GCIIRRNALVGMNAVVMDGAVIGE
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Template Sequence  LGAQVHIGNFVEVKGSSIGENTKAGHLTYIGNCEVGSNVNFGAGTITVNYDGKNKYKTVIGDNVFVGSNSTIIAPVELGD
Template Known Secondary structure 
TT
S

TT
S
TT

TT

BSSS
B


TT

TT
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T
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   337..340.........350.........360.........370.........380.........390.........400.........410......
 
   112.......120.........130.........140...
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Query Sequence  NSIVGASAFVKAKAEMPANYLIVGSPAKAIRE
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Template Sequence  NSLVGAGSTIT. . KDVPADAIAIGRGRQINKD
Template Known Secondary structure  T

TT

..S
B
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T
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   417..420....... ..430.........440......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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