 |
Job Description | P18843 | Confidence | 21.97% | Date | Thu Jan 5 11:37:11 GMT 2012 |
Rank | 83 | Aligned Residues | 96 |
% Identity | 18% | Template | d2eyqa4 |
SCOP info | P-loop containing nucleoside triphosphate hydrolases
| P-loop containing nucleoside triphosphate hydrolases
| Tandem AAA-ATPase domain
|
Resolution | 3.20 |
|
 |
  |   |
37 | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | |
. | . | . | . | . | 110 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|  |  |  |  |  |
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | P | F | I | K | S | L | V | L | G | I | S | G | G | Q | D | S | T | L | A | G | K | L | C | Q | M | A | I | N | E | L | R | L | E | T | G | N | E | S | L | Q | F | I | A | V | R | L | P | Y | G | V | Q | A | D | E | Q | D | C | Q | D | A | I | A | F | I | Q | P | D | . |
R | V | L | T | V | N | I | K | G | A | V |
Query Conservation |   |
  |   |
|   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |
|   |   |   |
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| . |   |   |   |   |
|   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
| . | . | . | . | . |
Template Conservation |   |
  |   |
|   |   |   |   |
|   |
|
|   |
|
|
|   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |
|   |   | . | . | . | . | . |
Template Sequence |   |
K | A | G | E | Q | R | L | L | G | E | L | T | G | A | A | C | A | T | L | V | A | E | I | A | E | R | H | A | G | P | V | V | L | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | P | D | M | Q | N | A | L | R | L | H | D | E | I | S | Q | F | T | D | Q | M | V | M | N | . |
. |
. |
. |
. |
Template Known Secondary structure |   |
S | T | T |
| B |
|
| B |
|
|
|
| T | T |  |  |  |  |  |  |  |  |  |  |  | S | S | S | S |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  | S | S |  |  |  |  |  |  |  |  |  |  |  | G | G | G |
| S | S |
|  |  |  | . | . | . | . | . |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
  |
  |   |
116 | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | |
. | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | A | S | E | Q | A | L | R | E | A | G | I | E | L | S | D | F | V | R | G | N | E | K | A | R | . |
E | R | M | K | A | Q | Y | S | I | A | G | M | T | S | G | V | V | V | G | T |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
| . |   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |
|
|
|
|
|
Alig confidence |   |
. | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . | . |
|
|   |   |
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |
|
|
|
|
|
Template Sequence |   |
. |
. |
. |
. |
. |
. |
L | A | D | W | E | T | L | P | Y | D | S | F | S | P | H | Q | D | I | I | S | S | R | L | S | T | L | Y | Q | L | P | T | M | Q | R | G | V | L | I | V | P |
Template Known Secondary structure |   |
. | . | . | . | . | . |
|
|
|
|
| S |
| T | T |
| S | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G |
|
| S |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
. | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|