|   |
39 | 40 | . | . | |
. | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | 110 |
Predicted Secondary structure |   |
|
|
|  | . |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
Query Sequence |   |
F | I | K | S | . |
L | V | L | G | I | S | G | G | Q | D | S | T | L | A | G | K | L | C | Q | M | A | I | N | E | L | R | L | E | T | G | N | E | S | L | Q | F | I | A | V | R | L | P | Y | G | V | Q | A | D | E | Q | D | C | Q | D | A | I | A | F | I | Q | . |
. |
. |
. |
. |
. |
. |
P | D | R | V | L | T | V | N |
Query Conservation |   |
|   |
|   | . |
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |
|   |   |   |
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . |   |
|   |   |   |   |
|   |
Alig confidence |   |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|
|
|
|   |   |
|
|
|   |
|
|   |
|   |   |   |
|
|   |   | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |
Template Sequence |   |
G | V | G | G | K | V | M | V | L | L | S | G | G | I | D | S | P | V | A | A | Y | L | T | M | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
R | G | V | S | V | E | A | V | H | F | H | S | P | P | F | T | S | E | R | A | K | Q | K | V | I | D | L | A | Q | E | L | T | K | Y | C | K | R | V | T | L | H | L | V | P |
Template Known Secondary structure |   |
| T | T |  |  |  |  |  |  |
|
| S | S | S |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | T | T |  |  |  |  |  |  |  |  |  |
| T | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G | S | S |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
175 | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . |
  |
  |   |
111 | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | |
|
|
|
|
|
. | . | . | . | . | . | 180 | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | K | G | A | V | L | A | S | E | Q | A | L | R | E | A | G | I | E | L | S | D | F | V | R | G | N | E | K | A | R | E | R | M | K | A | Q | Y | S | I | A | G | M | T | S | G | V | V | V | G | T | D | H | A | A | E | A | I | T | G | F | F | T | K | . |
. |
. |
. |
. |
. |
Y | G | D | G | G | T | D | I | N | P | L |
Query Conservation |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |
|
|
|
|
|
|
|   |
|
|   |   |   |
|
|   |
|   | . | . | . | . | . | . |   |
|
|   |   |   |
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
Template Sequence |   |
F | T | E | V | Q | K | T | I | N | K | E | I | P | S | S | Y | . |
. |
. |
. |
. |
. |
. |
S | M | T | V | M | R | R | M | M | M | R | I | T | E | R | I | A | E | E | R | N | A | L | A | I | T | T | G | E | S | L | G | Q | V | A | S | Q | T | L | D | S | M | H | T | I | N | E | V | T | N | Y | P | V | I | R | P | L |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  | S |
| G | G | G | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |
|
|
|
| S | S | S | T | T | S |
|
|  |  |  |  |  |  |  | G | G | G |
|
| S |
|  |  |
| T | T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
244 | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . |
  |
  |   |
185 | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | R | L | N | K | R | Q | G | K | Q | L | L | A | A | L | A | C | P | E | H | L | Y | K | K | A | P | T | A | D | L | E | D | D | R | P | S | L | P | D | E | V | A | L | G | V | T | Y | D | N | I | D | D | Y | L | E | G |
Query Conservation |   |
  |   |
|   |
|   |
|
|
|   |
|
|
|   |
|
|
|
|   |   |
|   |   |
|   |
|
|
|   |
|   |   |   |
|   |   |   |
|
|
|   |   |
|
|   |   |
|   |   |
|
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |
|
|   |   |   |
|   |   |
|
|   |   | . |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   | . | . | . |   |   |
|   |   |   |   |   |   |   |   | . |   |
|   |   |   |   |   |
Template Sequence |   |
I | T | M | D | K | L | E | I | I | K | I | A | E | E | I | G | T | Y | . |
D | I | S | I | R | P | Y | K | P | K | R | E | K | A | N | . |
. |
. |
R | F | E | A | K | Y | D | F | T | P | L | . |
I | D | E | A | V | A | N |
Template Known Secondary structure |   |
T | T |
|
|  |  |  |  |  |  |  |  |  |  | T | T |
|  | . |  |  |  | T | S |
|
|
|
|
|  |  |  |  |  | . | . | . |  |  |  | T | T | S |
|
|  |  |  | . |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
| . |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  | . | . | . |  |  |  |  |  |
|
|  |  |  |  | . |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
317 | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | |
. | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | |
|
|
350 | . | . | . | . | . | . | . | . | . | 360 | |
. | . | . | . | . | . | . |
  |