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Job DescriptionP18843
Confidence100.00%DateThu Jan 5 11:37:11 GMT 2012
Rank15Aligned Residues209
% Identity19%Templatec3tqiB_
PDB info PDB header:ligaseChain: B: PDB Molecule:gmp synthase [glutamine-hydrolyzing]; PDBTitle: structure of the gmp synthase (guaa) from coxiella burnetii
Resolution2.84 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  LQQQIIKALGAKPQINAEEEIRRSVDFLKSYLQTYPFIKSLVLGISGGQDSTLAGKLCQMAINELRLETGNESLQFIAVR
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Template Sequence  LAHFVIHICQCIPNWTTKHIIEDSIRDIQEKV. . . . GKEQVIVGLSGGVDSAVTATLVHKAIG. DQL. . . . . . . VCVLVD
Template Known Secondary structure  TTS






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   194.....200.........210.........220..... ....230.........240.........250.. ... ....260.
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  LPYGVQADEQDCQDAIAFIQPDRVLTVNIKGAVLASEQALREAGIELSDFVRGNEKARERMKAQYSIAGMTSGVVVGTDH
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Template Sequence  TGLLRLNEVDEVLNVFQKHLGAKVICVDAKDRFMKALKGISDPE. . . . . . EKRKIAGEQFIRVFEEQAKKLNVKWLGQG.
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   262.......270.........280.........290.........300..... ....310.........320.........330....
 
   163......170...... ...180.........190.........200.........210. ........220.........230........
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Query Sequence  AAEAITGFFTKYGD. . GGTDINPLYRLNKRQGKQLLAALACPEHLYKKAPT. . ADLEDDRPSLPDEVALGVTYDNIDDYL
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Template Sequence  . . . . . . . . . TIYPDVIESKLIEPLRELFKDEVRKLGLELGLPADLIYRHPFPGPGLAIRILGEVSAEYI. NILKQADAIF
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TTTT

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TTGGGTTB
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   335....340.........350.........360.........370.........380.........390.... .....400....
 
   239240
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Query Sequence  EG
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   431.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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