Job Description P18843 Confidence 100.00% Date Thu Jan 5 11:37:11 GMT 2012 Rank 8 Aligned Residues 233 % Identity 20% Template c3n05B_ PDB info PDB header:ligase Chain: B: PDB Molecule:nh(3)-dependent nad(+) synthetase; PDBTitle: crystal structure of nh3-dependent nad+ synthetase from streptomyces2 avermitilis Resolution 2.35 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		G	A	K	P	Q	I	N	A	E	E	E	I	R	R	S	V	D	.	F	L	K	S	Y	L	Q	T	Y	P	F	I	K	S	L	V	L	G	I	S	G	G	Q	D	S	T	L	A	G	K	L	C	Q	M	A	I	N	E	L	R	L	E	T	G	N	E	S	L	Q	F	I	A	V	R	L	P	Y	G	V	Q	A	D
Query Conservation																			.
Alig confidence																			.									.																																	.	.	.	.	.	.	.	.	.
Template Conservation																												.																																	.	.	.	.	.	.	.	.	.
Template Sequence		G	Y	A	D	R	L	D	A	D	E	E	V	Y	S	A	L	V	V	G	L	R	A	Y	V	A	K	.	N	G	F	R	S	V	L	I	G	L	S	G	G	I	D	S	A	L	V	A	A	I	A	C	D	A	L	G	A	Q	N	V	.	.	.	.	.	.	.	.	.	Y	G	V	S	M	P	S	K	Y	S	S	D
Template Known Secondary structure			B																								T	.	T	T										S	S																G	G	G		.	.	.	.	.	.	.	.	.								T	T
Template Predicted Secondary structure																												.																																	.	.	.	.	.	.	.	.	.
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.		.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.										.	.	.	.	.	.	360	.	.	.	.	.
		91	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		E	Q	.	D	C	Q	D	A	I	A	F	I	Q	P	D	R	V	L	T	V	N	I	K	G	A	V	L	A	S	E	Q	A	L	R	E	A	G	I	E	L	S	D	F	V	R	G	N	E	K	A	R	E	R	M	K	A	Q	Y	S	I	A	G	M	T	S	G	V	V	V	G	T	D	H	A	A	E	A	I	T	G
Query Conservation				.
Alig confidence				.																																.	.	.	.	.
Template Conservation																																				.	.	.	.	.
Template Sequence		H	S	K	G	D	A	A	E	L	A	R	R	T	G	L	N	F	R	T	V	S	I	E	P	M	F	D	A	Y	M	A	S	L	G	.	.	.	.	.	L	T	G	L	A	E	E	N	L	Q	S	R	L	R	G	T	T	L	M	A	I	S	N	Q	E	G	H	I	V	L	A	P	G	N	K	S	E	L	A	V	G
Template Known Secondary structure													T	T	T								S											S		.	.	.	.	.																														B											T
Template Predicted Secondary structure																																				.	.	.	.	.
Template SS confidence
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.						400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.																																								.	.	.	.	.	.	.	.	.
Query SS confidence																																	.																																								.	.	.	.	.	.	.	.	.
Query Sequence		F	F	T	K	Y	G	D	G	G	T	D	I	N	P	L	Y	R	L	N	K	R	Q	G	K	Q	L	L	A	A	L	A	.	C	P	E	H	L	Y	K	K	A	P	T	A	D	L	E	D	D	R	P	S	L	P	D	E	V	A	L	G	V	T	Y	D	N	I	D	D	Y	L	E	.	.	.	.	.	.	.	.	.
Query Conservation																																	.																																								.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.																					.																			.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	S	S	V	G	A	.	.	.	.	.	Y	G	P	I	K	D	V	Y	K	T	S	I	F	R	L	A	E	W	R	N	R	A	A	A	E	R	G	Q	T	P	P	I	P	E	A	S	I	T	K	.	.	.	.	.	.	.	.	.	.	P	D	Y	P	V	L	D	A	I	L	E	L	Y	V	D	R	D	T	G	A
Template Known Secondary structure						S	S	.	.	.	.	.	B		T	T	T	T	S																		T	T	T				S	S						T		.	.	.	.	.	.	.	.	.	.														T	T	T
Template Predicted Secondary structure								.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		441	.	.	.	.	.						.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.											.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.
						240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.		.	.	.	.	.							.	270	.	.	.	.
Predicted Secondary structure		.	.	.	.																									.						.	.	.	.	.	.
Query SS confidence		.	.	.	.																									.						.	.	.	.	.	.
Query Sequence		.	.	.	.	G	K	N	V	P	Q	Q	V	A	R	T	I	E	N	W	Y	L	K	T	E	H	K	R	R	.	P	P	I	T	V	.	.	.	.	.	.	F	D	D	F	W	K
Query Conservation		.	.	.	.																									.						.	.	.	.	.	.
Alig confidence		.	.	.	.																									.						.	.	.	.	.	.
Template Conservation
Template Sequence		D	A	I	V	A	A	G	Y	D	R	E	L	V	V	K	T	L	R	M	V	D	T	A	E	Y	K	R	R	Q	Y	P	P	G	T	K	I	S	A	K	G	F	G	K	D	R	R
Template Known Secondary structure								T																T						S	S								S	S	S	S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		527	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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