Job Description P18843 Confidence 20.67% Date Thu Jan 5 11:37:11 GMT 2012 Rank 86 Aligned Residues 49 % Identity 20% Template c3kv1A_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional repressor; PDBTitle: crystal structure of putative sugar-binding domain of transcriptional2 repressor from vibrio fischeri Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.							.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50
Predicted Secondary structure																			.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.
Query Sequence		M	T	L	Q	Q	Q	I	I	K	A	L	G	A	K	P	Q	I	.	.	.	.	.	.	N	A	E	E	E	I	R	R	S	V	D	F	L	K	S	Y	L	Q	T	Y	P	F	I	K	S	L	V	L	G	I	S	G	G
Query Conservation																			.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.																					.
Template Conservation																																													.
Template Sequence		V	Q	L	E	Q	K	L	V	E	K	F	N	L	K	R	A	L	I	S	L	D	Q	P	N	T	N	E	Q	R	K	Q	V	A	A	L	V	S	S	Y	L	N	N	N	.	L	Q	E	G	X	A	V	A	V	G	Q	G
Template Known Secondary structure													T		S									S	S																				.			T	T								S
Template Predicted Secondary structure																																													.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions