Job Description P18843 Confidence 99.46% Date Thu Jan 5 11:37:11 GMT 2012 Rank 27 Aligned Residues 144 % Identity 12% Template c3k32D_ PDB info PDB header:transferase Chain: D: PDB Molecule:uncharacterized protein mj0690; PDBTitle: the crystal structure of predicted subunit of trna2 methyltransferase from methanocaldococcus jannaschii dsm Resolution 2.50 Å

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	L	G	I	S	G	G	Q	D	S	T	L	A	G	K	L	C	Q	M	A	I	N	E	L	R	L	E	T	G	N	E	S	L	Q	F	I	A	V	R	L	P	Y	G	V	Q	A	D	E	Q	D	C	Q	D	A	I	A	F	I	Q	P	D	R	V	L	T	V	N	I	K	G	A	V	L	A	S	E	Q	A	L
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.																													.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.																													.
Template Sequence		V	H	V	L	F	S	G	G	K	D	S	S	L	S	A	V	I	L	K	K	.	.	.	.	.	.	.	.	.	.	.	L	G	Y	N	P	H	L	I	T	I	N	F	G	V	I	P	S	Y	K	L	A	E	E	T	A	K	I	L	.	G	F	K	H	K	V	I	T	L	D	R	K	I	V	E	K	A	A	D	X
Template Known Secondary structure								S	S													.	.	.	.	.	.	.	.	.	.	.	T	T											S	S	S		T	T											.	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.																													.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.												.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.						.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.
Query SS confidence																																													.	.	.	.	.
Query Sequence		R	E	A	G	I	E	L	S	D	F	V	R	G	N	E	K	A	R	E	R	M	K	A	Q	Y	S	I	A	G	M	T	S	G	V	V	V	G	T	D	H	A	A	E	.	.	.	.	.	A	I	T	G	F	F	T	K	Y	G	D	G	G	T	D	I	N	P	L	Y	R	L	N	K	R	Q	G	K	Q	L	L	A
Query Conservation																																													.	.	.	.	.
Alig confidence													.	.	.	.	.																												.	.	.	.	.
Template Conservation													.	.	.	.	.
Template Sequence		I	I	E	H	K	Y	P	G	P	A	I	.	.	.	.	.	Q	Y	V	H	K	T	V	L	E	I	L	A	D	E	Y	S	I	L	A	D	G	T	R	R	D	D	R	V	P	K	L	S	Y	S	E	I	Q	S	L	E	X	R	K	N	I	Q	Y	I	T	P	L	X	G	F	G	Y	K	T	L	R	H	L	A	S
Template Known Secondary structure						S	S	S					.	.	.	.	.												T	T	T		S								T	T			S	S																					G	G	G	G
Template Predicted Secondary structure													.	.	.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.						.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		198	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	A	C	P	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	F	F	I	L	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions