Job Description P18843 Confidence 100.00% Date Thu Jan 5 11:37:11 GMT 2012 Rank 9 Aligned Residues 254 % Identity 17% Template c3ilvA_ PDB info PDB header:ligase Chain: A: PDB Molecule:glutamine-dependent nad(+) synthetase; PDBTitle: crystal structure of a glutamine-dependent nad(+) synthetase2 from cytophaga hutchinsonii Resolution 1.79 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	Q	I	N	A	E	E	E	I	R	R	S	V	D	.	F	L	K	S	Y	L	Q	T	Y	P	F	I	K	S	L	V	L	G	I	S	G	G	Q	D	S	T	L	A	G	K	L	C	Q	M	A	I	N	E	L	R	L	E	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.									.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.
Template Sequence		A	T	L	E	K	E	F	E	F	W	E	A	T	S	L	G	L	F	D	Y	X	R	K	.	S	R	S	K	G	F	V	L	S	L	S	G	G	A	D	S	S	A	C	A	I	X	V	A	E	X	I	R	K	G	L	K	E	L	G	L	T	A	F	L	Q	K	S	N	X	E	T	L	F	D	L	P	A	L	Q	H
Template Known Secondary structure																									.	T	T			S							S	S																															T		G	G	G			S	S		S	S
Template Predicted Secondary structure																									.
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.		.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
								73	.	.	.	.	.	.	80	.	.	.	.	.						.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.						.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.														.	.	.	.	.																																								.	.	.	.	.
Query SS confidence		.	.	.	.	.	.														.	.	.	.	.																																								.	.	.	.	.
Query Sequence		.	.	.	.	.	.	N	E	S	L	Q	F	I	A	V	R	L	P	Y	.	.	.	.	.	G	V	Q	A	D	E	Q	D	C	Q	D	A	I	A	F	I	Q	P	D	R	V	L	T	V	N	I	K	G	A	V	L	A	S	E	Q	A	L	R	E	.	.	.	.	.	A	G	I	E	L	S	D	F	V	R	G	N
Query Conservation		.	.	.	.	.	.														.	.	.	.	.																																								.	.	.	.	.
Alig confidence		.	.	.	.	.	.														.	.	.	.	.																	.																							.	.	.	.	.
Template Conservation																																										.
Template Sequence		L	P	F	E	E	Q	A	K	K	I	T	A	V	F	L	T	T	A	Y	Q	S	T	R	N	S	G	D	E	T	Y	T	S	A	K	T	L	A	E	S	I	.	G	A	T	F	Y	N	W	S	V	D	E	E	I	E	Q	Y	K	A	T	I	E	N	V	I	E	R	P	L	T	W	E	K	D	D	I	T	L	Q	N
Template Known Secondary structure		T	T	S																				T	T			S														.	T																							T	T	S				T	T	T
Template Predicted Secondary structure																																										.
Template SS confidence
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.		.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	A	R	E	R	M	K	A	Q	Y	S	I	A	G	M	T	S	G	V	V	V	G	T	D	H	A	A	E	A	I	T	G	F	F	T	K	Y	G	D	G	G	T	D	I	N	P	L	Y	R	L	N	K	R	Q	G	K	Q	L	L	A	A	L	A	C	P	E	H	L	Y	K	K	A	P	T	A	D	L	E	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	Q	A	R	G	R	A	P	I	I	W	X	L	T	N	V	K	Q	A	L	L	I	T	T	S	N	R	S	E	G	D	V	G	Y	A	T	X	D	G	D	T	A	G	G	I	A	P	I	A	G	V	D	K	D	F	I	R	S	W	L	R	W	A	E	K	N	R	N	Q	H	G	L	H	I	V	N	D	L	X	P
Template Known Secondary structure						T	T												T				B										T	T		S		T	T	T	T	T		S	S	B	B	T	T	T	T	S																S			G	G	G	S	S						T
Template Predicted Secondary structure
Template SS confidence
		434	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.
										217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.					.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.		.	.	.	.							.	270			.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																																	.	.	.	.																	.					.	.	.	.	.	.			.	.
Query SS confidence		.	.	.	.	.	.	.	.																																	.	.	.	.																	.					.	.	.	.	.	.			.	.
Query Sequence		.	.	.	.	.	.	.	.	D	R	P	S	L	P	D	E	V	A	L	G	V	T	Y	D	N	I	D	D	Y	L	E	G	K	N	V	P	Q	Q	V	A	.	.	.	.	R	T	I	E	N	W	Y	L	K	T	E	H	K	R	R	P	.	P	I	T	V	.	.	.	.	.	.	F	D	.	.	D	F	W	K
Query Conservation		.	.	.	.	.	.	.	.																																	.	.	.	.																	.					.	.	.	.	.	.			.	.
Alig confidence		.	.	.	.	.	.	.	.			.	.	.								.																				.	.	.	.																	.					.	.	.	.	.	.			.	.
Template Conservation												.	.	.								.
Template Sequence		Y	D	V	L	A	R	I	E	R	K	.	.	.	A	I	K	E	R	L	S	.	P	V	Q	V	Y	T	A	L	L	T	E	G	P	Y	T	K	N	E	F	K	Y	W	V	K	K	F	F	R	L	W	S	I	N	Q	W	K	R	E	R	L	A	P	S	F	H	X	D	D	F	N	I	D	P	R	S	W	Y	R
Template Known Secondary structure		T	T									.	.	.		T	T	S				.													S	S																			T					T	T				B				S	S					T	T	T	T
Template Predicted Secondary structure												.	.	.								.
Template SS confidence
		533	.	.	.	.	.	.	540	.	.				.	.	.	.	.	.	.		550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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