Job Description P18843 Confidence 100.00% Date Thu Jan 5 11:37:11 GMT 2012 Rank 7 Aligned Residues 236 % Identity 22% Template c3dlaD_ PDB info PDB header:ligase Chain: D: PDB Molecule:glutamine-dependent nad(+) synthetase; PDBTitle: x-ray crystal structure of glutamine-dependent nad+ synthetase from2 mycobacterium tuberculosis bound to naad+ and don Resolution 2.35 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.						.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																																																.	.	.	.	.
Query SS confidence																																																.	.	.	.	.
Query Sequence		A	E	E	E	I	R	R	S	V	D	F	L	K	S	Y	L	Q	T	Y	P	F	I	K	S	L	V	L	G	I	S	G	G	Q	D	S	T	L	A	G	K	L	C	Q	M	A	I	.	.	.	.	.	N	E	L	R	L	E	T	G	N	E	S	L	Q	F	I	A	V	R	L	P	Y	G	V	Q	A	D	E	Q	D
Query Conservation																																																.	.	.	.	.
Alig confidence																				.																												.	.	.	.	.						.	.	.	.	.	.	.	.	.							.	.	.	.	.
Template Conservation																				.																																						.	.	.	.	.	.	.	.	.							.	.	.	.	.
Template Sequence		C	Y	E	A	Y	N	I	Q	V	S	G	L	E	Q	R	L	R	A	.	L	D	Y	P	K	V	V	I	G	V	S	G	G	L	D	S	T	H	A	L	I	V	A	T	H	A	M	D	R	E	G	R	P	R	S	D	I	.	.	.	.	.	.	.	.	.	L	A	F	A	L	P	.	.	.	.	.	G	F	N	N
Template Known Secondary structure																				.	T	T	S									S	S																	T	T			G	G	G		.	.	.	.	.	.	.	.	.							.	.	.	.	.
Template Predicted Secondary structure																				.																																						.	.	.	.	.	.	.	.	.							.	.	.	.	.
Template SS confidence
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.		.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.										.	.	.	.	.	400						.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.				.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure																															.	.	.
Query SS confidence																															.	.	.
Query Sequence		C	Q	D	A	I	A	F	I	Q	P	D	R	V	L	T	V	N	I	K	G	A	V	L	A	S	E	Q	A	L	.	.	.	R	E	A	G	I	E	L	S	D	F	V	R	G	N	E	K	A	R	E	R	M	K	A	Q	Y	S	I	A	G	M	T	S	G	V	V	V	G	T	D	H	A	A	E	A	I	T	G	F
Query Conservation																															.	.	.
Alig confidence										.																					.	.	.
Template Conservation										.
Template Sequence		A	I	K	L	A	R	A	L	.	G	V	T	F	S	E	I	D	I	G	D	T	A	R	L	M	L	H	T	I	G	H	P	Y	S	V	G	E	K	V	Y	D	V	T	F	E	N	V	Q	A	G	L	R	T	D	Y	L	F	R	I	A	N	Q	R	G	G	I	V	L	G	T	G	D	L	S	E	L	A	L	G	W
Template Known Secondary structure										.	T								T											T	T		G	G	G	G	T																												T															T
Template Predicted Secondary structure										.
Template SS confidence
		412	.	.	.	.	.	.	.		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
		171	.	.		.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure					.																																																																		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.																																																																		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	T	K	.	Y	G	D	G	G	T	D	I	N	P	L	Y	R	L	N	K	R	Q	G	K	Q	L	L	A	A	L	A	C	P	E	H	L	Y	K	K	A	P	T	A	D	L	E	D	D	R	P	S	L	P	D	E	V	A	L	G	V	T	Y	D	N	I	D	D	Y	L	.	.	.	.	.	.	.	.	.	.	.
Query Conservation					.																																																																		.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.																																														.	.	.								.										.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.								.
Template Sequence		S	T	Y	G	V	G	D	Q	M	S	H	Y	N	V	N	A	G	V	P	K	T	L	I	Q	H	L	I	R	W	V	I	S	A	G	E	F	G	E	K	V	G	E	V	L	Q	S	V	L	D	.	.	.	T	E	E	A	K	V	G	.	P	F	A	L	Q	D	F	S	L	F	Q	V	L	R	Y	G	F	R	P	S
Template Known Secondary structure		S			S	S	S	T	T			S			S	S	T	T																		S	S														.	.	.				T	T	S		.
Template Predicted Secondary structure																																																			.	.	.								.
Template SS confidence
		491	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.				540	.	.	.	.	.	.		.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.
																											239	240	.	.	.	.	.	.	.	.	.	250	.	.						.	.	.	.	.	.	.	260	.	.	.			.	.	.	.	.	.	270	.									.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.												.	.									.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.												.	.									.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	G	K	N	V	P	Q	Q	V	A	R	T	I	E	.	.	.	.	.	N	W	Y	L	K	T	E	H	K	R	R	.	.	P	P	I	T	V	F	D	D	.	.	.	.	.	.	.	.	F	W	K
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.												.	.									.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.												.	.									.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	I	A	F	L	A	W	H	A	W	N	D	A	E	R	G	N	W	P	P	G	F	P	K	S	E	R	P	S	Y	S	L	A	E	I	R	H	W	L	Q	I	F	V	Q	R	F	Y	S	F	S	Q	F	K	R	S	A	L	P	N	G	P	K	V	S	H	G	G	A	L	S	P	R	G	D	W	R
Template Known Secondary structure												S		T	T	S	S				T	T			S	S	S																						T	T	S						T									T	T					T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		583	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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