Job Description P18843 Confidence 99.92% Date Thu Jan 5 11:37:11 GMT 2012 Rank 19 Aligned Residues 159 % Identity 22% Template c2hmaA_ PDB info PDB header:transferase Chain: A: PDB Molecule:probable trna (5-methylaminomethyl-2-thiouridylate)- PDBTitle: the crystal structure of trna (5-methylaminomethyl-2-thiouridylate)-2 methyltransferase trmu from streptococcus pneumoniae Resolution 2.41 Å

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90							.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.
Query Sequence		K	S	L	V	L	G	I	S	G	G	Q	D	S	T	L	A	G	K	L	C	Q	M	A	I	N	E	L	R	L	E	T	G	N	E	S	L	Q	F	I	A	V	R	L	P	Y	G	V	Q	A	D	.	.	.	.	.	.	E	Q	D	C	Q	D	A	I	A	F	I	Q	P	D	R	V	L	T	V	N	I	K	G	A
Query Conservation																																																				.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.												.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.																																.
Template Sequence		T	R	V	V	V	G	X	S	G	G	V	D	S	S	V	T	A	L	L	L	K	E	Q	G	Y	.	.	.	.	.	.	.	.	.	.	.	D	V	I	G	I	F	X	K	N	W	D	D	T	D	C	T	A	T	E	D	Y	K	D	V	V	A	V	A	D	Q	I	.	G	I	P	Y	Y	S	V	N	F	E	K	E
Template Known Secondary structure		S								S	S													T	T		.	.	.	.	.	.	.	.	.	.	.																																.	T
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.																																.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.												.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.					.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.						170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure																										.	.	.	.																																.	.	.	.	.														.	.	.
Query SS confidence																										.	.	.	.																																.	.	.	.	.														.	.	.
Query Sequence		V	L	A	S	E	Q	A	L	R	E	A	G	I	E	L	S	D	F	V	R	G	N	E	K	.	.	.	.	A	R	E	R	M	K	A	Q	Y	S	I	A	G	M	T	S	G	V	V	V	G	T	D	H	A	A	E	A	I	T	G	.	.	.	.	.	F	F	T	K	Y	G	D	G	G	T	D	I	N	.	.	.
Query Conservation																										.	.	.	.																																.	.	.	.	.														.	.	.
Alig confidence						.	.																			.	.	.	.																																.	.	.	.	.														.	.	.
Template Conservation						.	.
Template Sequence		Y	W	D	R	.	.	V	F	E	Y	F	L	A	E	Y	R	A	G	R	T	P	N	P	D	V	X	C	N	K	E	I	K	F	K	A	F	L	D	Y	A	I	T	L	G	A	D	Y	V	A	T	G	H	Y	A	R	V	A	R	D	E	D	G	T	V	H	X	L	R	G	V	D	N	G	K	D	Q	T	Y	F	L
Template Known Secondary structure						.	.	T										T	T													T	T	T	T								T	T	T		S							S							S	S	S								S	S	T	T	T			G	G	G	G
Template Predicted Secondary structure						.	.
Template SS confidence
		79	80	.	.			.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
															183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	P	L	Y	R	L	N	K	R	Q	G	K	Q	L	L	A	A	L	A	C	P	E	H	L	Y	K	K	A	P	T	A	D	L	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Template Conservation																																			.	.
Template Sequence		S	Q	L	S	Q	E	Q	L	Q	K	T	X	F	P	L	G	H	L	E	K	P	E	V	R	R	L	A	E	E	A	G	L	S	.	.	T	A	K	K	K	D	S	T	G	I	C
Template Known Secondary structure		T	T							T	T				T	T	T	T													T	T		T	.	.	T	T	T						S		T
Template Predicted Secondary structure																																			.	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.			190	.	.	.	.	.	.	.	.	.	200

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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