Job Description P18843 Confidence 100.00% Date Thu Jan 5 11:37:11 GMT 2012 Rank 5 Aligned Residues 229 % Identity 30% Template c2e18B_ PDB info PDB header:ligase Chain: B: PDB Molecule:nh(3)-dependent nad(+) synthetase; PDBTitle: crystal structure of project ph0182 from pyrococcus horikoshii ot3 Resolution 2.10 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	R	S	V	D	F	L	K	S	Y	L	Q	T	Y	P	F	I	K	S	L	V	L	G	I	S	G	G	Q	D	S	T	L	A	G	K	L	C	Q	M	A	I	N	E	L	R	L	E	T	G	N	E	S	L	Q	F	I	A	V	R	L	P	Y	G	V	Q	A	D	E	Q	D	C	Q	D	A	I	A	F	I	Q
Query Conservation
Alig confidence																.																																	.	.	.	.	.	.	.	.	.																								.
Template Conservation																.																																	.	.	.	.	.	.	.	.	.																								.
Template Sequence		Y	D	K	V	I	E	R	I	L	E	F	I	R	E	.	K	G	N	N	G	V	V	I	G	I	S	G	G	V	D	S	A	T	V	A	Y	L	A	T	K	A	L	G	K	E	K	V	.	.	.	.	.	.	.	.	.	L	G	L	I	M	P	Y	F	E	N	K	D	V	E	D	A	K	L	V	A	E	K	L	.
Template Known Secondary structure																.			T	T								S	S																G	G	G		.	.	.	.	.	.	.	.	.							S	S		S														.
Template Predicted Secondary structure																.																																	.	.	.	.	.	.	.	.	.																								.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.										.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	R	V	L	T	V	N	I	K	G	A	V	L	A	S	E	Q	A	L	R	E	A	G	I	E	L	S	D	F	V	R	G	N	E	K	A	R	E	R	M	K	A	Q	Y	S	I	A	G	M	T	S	G	V	V	V	G	T	D	H	A	A	E	A	I	T	G	F	F	T	K	Y	G	D	G	G	T	D	I	N
Query Conservation
Alig confidence																						.	.	.
Template Conservation																						.	.	.
Template Sequence		G	I	G	Y	K	V	I	N	I	K	P	I	V	D	S	F	V	E	N	L	.	.	.	E	L	N	L	D	R	K	G	L	G	N	I	M	S	R	T	R	M	I	M	L	Y	A	H	A	N	S	L	G	R	I	V	L	G	T	S	N	R	S	E	F	L	T	G	Y	F	T	K	W	G	D	G	A	S	D	Y	A
Template Known Secondary structure		T																				.	.	.		S																											T															T		S		T	T	T	T	T		S	S	B
Template Predicted Secondary structure																						.	.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.				.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.															.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	L	Y	R	L	N	K	R	Q	G	K	Q	L	L	A	A	L	A	C	P	E	H	L	Y	K	K	A	P	T	A	D	L	E	D	D	R	P	S	L	P	D	E	V	A	L	G	V	T	Y	D	N	I	D	D	Y	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	G	K	N	V	P	Q	Q	V	A
Query Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.
Template Sequence		P	I	I	N	L	Y	K	T	E	V	W	E	I	A	K	R	I	G	V	P	E	R	I	V	K	K	K	P	S	A	G	L	W	E	G	Q	.	.	.	T	D	E	D	E	L	G	I	S	Y	N	L	L	D	E	I	L	W	R	M	I	D	L	K	I	G	K	E	E	I	A	K	D	L	G	I	P	L	S	L	V
Template Known Secondary structure		T	T	T	T	S												T	T								S						S	S	T	T		.	.	.							T	S														T	S												T	S
Template Predicted Secondary structure																																						.	.	.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.				.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	I	E	N	W	Y	L	K	T	E	H	K	R	R	P	P	I	T	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	R	V	E	E	L	I	K	K	S	E	H	K	R	R	L	P	I	G	P
Template Known Secondary structure										T	T	G	G	G	S	S
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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