Job Description A4UR78 Confidence 97.52% Date Thu Jan 5 10:55:06 GMT 2012 Rank 76 Aligned Residues 141 % Identity 16% Template d2phla1 SCOP info Double-stranded beta-helix RmlC-like cupins Germin/Seed storage 7S protein Resolution 2.20

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.									.	.	.	.	70	.	.	.
Predicted Secondary structure																													.																													.	.							.	.	.	.	.	.	.	.
Query SS confidence																													.																													.	.							.	.	.	.	.	.	.	.
Query Sequence		V	I	N	A	P	E	I	A	T	A	R	E	Q	Q	L	F	N	G	K	N	F	H	V	F	I	Y	N	.	K	T	E	S	I	S	G	L	H	Q	H	D	Y	Y	E	F	T	L	V	L	T	G	R	Y	F	Q	E	I	.	.	N	G	K	R	V	L	.	.	.	.	.	.	.	.	L	E	R	G	D	F	V	F
Query Conservation																													.																													.	.							.	.	.	.	.	.	.	.
Alig confidence																													.																													.	.							.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	I	R	V	L	Q	R	F	D	Q	Q	S	K	R	L	Q	N	L	E	D	Y	R	L	V	E	F	R	S	K	P	E	T	L	L	L	P	Q	Q	A	D	A	E	L	L	L	V	V	R	S	G	S	A	I	L	V	L	V	K	P	D	D	R	R	E	Y	F	F	L	T	S	D	N	P	I	F	S	D	H	Q	K
Template Known Secondary structure														G	G	G	G	G	G	T	T										S	S									S										S									T	T	T									S	S		T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	L	G	S	H	H	Q	S	F	Y	E	F	G	A	T	R	I	L	N	V	G	I	S	K	R	F	F	E	Q	H	Y	L	P	L	L	P	Y	C	F	V	A	S	Q	V	Y	R	T	N	N	A	F	L	T	Y	V	E	T	V	I	S	S	L	N	F	R	E	T	G	L	E	E	L	V	E	M	V	T	F	Y
Query Conservation
Alig confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	P	A	G	T	I	F	Y	L	V	N	P	D	P	K	E	D	L	R	I	I	Q	L	A	M	P	V	N	N	P	Q	I	H	E	F	F	L	S	S	T	E	A	Q	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				T	T										S	S												S	S	S	S	S									B	T	T	B		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	N	R	L	R	H	Y	R	E	E	Q	V	I	D	D	V	P	Q	W	L	K	S	T	V	E	K	M	H	D	K	E	Q	F	S	E	S	A	L	E	N	M	V	A	L	S	A	K	S	Q	E	Y	L	T	R	A	T	Q	R
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	Y	L	Q	E	F	S	K	H	I	L	E	A	S	F	N	S	K	F	E	E	I	N	R	V	L	F	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G	G	S										T	S										T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																	156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions