Return to main results Retrieve Phyre Job Id

Job DescriptionA4UR78
Confidence98.06%DateThu Jan 5 10:55:06 GMT 2012
Rank56Aligned Residues92
% Identity17%Templated1uika1
SCOP infoDouble-stranded beta-helix RmlC-like cupins Germin/Seed storage 7S protein
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30. ........40.........50......... 60.........70.........
Predicted Secondary structure 











.











....










Query SS confidence 


























.



























. . . .



















Query Sequence  VINAPEIATAREQQLFNGKNFHVFIYN. KTESISGLHQHDYYEFTLVLTGRYFQEI. . . . NGKRVLLERGDFVFIPLGSH
Query Conservation                             .        
 
    
  
  
      ....      
  
    
     
Alig confidence 


























.



























....



















Template Conservation   
            
  
    
    
 
     

   
 

 

  
 
 
 

         
  


  

 
  
Template Sequence  HVRVLQRFNKRSQQLQNLRDYRILEFNSKPNTLLLPHHADADYLIVILNGTAILTLVNNDDRDSYNLQSGDALRVPAGTT
Template Known Secondary structure 

TTSS
GGGGGGTT

SSSS
SS
TT

TT
Template Predicted Secondary structure 





































Template SS confidence 















































































   167..170.........180.........190.........200.........210.........220.........230.........240......
 
   80.........90......
Predicted Secondary structure 




Query SS confidence 
















Query Sequence  HQSFYEFGATRILNVGI
Query Conservation                   
Alig confidence 
















Template Conservation      
    
 
     
Template Sequence  YYVVNPDNDENLRMITL
Template Known Secondary structure 

SS

Template Predicted Secondary structure 





Template SS confidence 
















   247..250.........260...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions