Job Description A4UR78 Confidence 77.64% Date Thu Jan 5 10:55:06 GMT 2012 Rank 323 Aligned Residues 152 % Identity 7% Template c3e6dA_ PDB info PDB header:transcription regulation Chain: A: PDB Molecule:cyclic nucleotide-binding protein; PDBTitle: crystal structure of cprk c200s Resolution 2.00 Å

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		58	.	60	.	.	.	.	.	.	.	.	.	70					.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure															.	.	.	.
Query SS confidence															.	.	.	.
Query Sequence		E	I	N	G	K	R	V	L	L	E	R	G	D	.	.	.	.	F	V	F	I	P	L	G	S	H	H	Q	S	F	Y	E	F	G	A	T	R	I	L	N	V	G	I	S	K	R	F	F	E	Q	H	Y	L	P	L	L	P	Y	C	F	V	A	S	Q	V	Y	R	T	N	N	A	F	L	T	Y	V	E	T	V	I
Query Conservation															.	.	.	.
Alig confidence															.	.	.	.																																																					.	.	.
Template Conservation																																																																							.	.	.
Template Sequence		D	F	A	K	G	S	A	V	I	M	P	G	E	E	I	T	S	M	I	F	L	V	E	G	K	I	K	L	D	I	I	F	E	D	G	S	E	K	L	L	Y	Y	A	G	G	N	S	L	I	G	K	L	Y	P	T	G	N	N	I	Y	A	T	A	M	E	P	T	R	T	.	.	.	C	W	F	S	E	K	S	L
Template Known Secondary structure					T	T						T	T												S									T	T	S										T	T						S	S			S								S	S	S				.	.	.
Template Predicted Secondary structure																																																																							.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.				.	.	.	.	.	110	.	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.			.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure																																																								.	.
Query SS confidence																																																								.	.
Query Sequence		S	S	L	N	F	R	E	T	G	L	E	E	L	V	E	M	V	T	F	Y	V	I	N	R	L	R	H	Y	R	E	E	Q	V	I	D	D	V	P	Q	W	L	K	S	T	V	E	K	M	H	D	K	E	Q	F	.	.	S	E	S	A	L	E	N	M	V	A	L	S	A	K	S	Q	E	Y	L	T	R	A	T	Q
Query Conservation																																																								.	.
Alig confidence																																																								.	.
Template Conservation
Template Sequence		R	T	V	F	R	T	D	E	D	M	I	F	E	I	F	K	N	Y	L	T	K	V	A	Y	Y	A	R	Q	V	P	T	I	R	I	L	R	L	F	Y	E	L	C	S	S	Q	G	K	R	V	G	D	T	Y	E	I	T	M	P	L	S	Q	K	S	I	G	E	I	T	G	V	H	H	V	T	V	S	R	V	L	A
Template Known Secondary structure									T																																										T	T
Template Predicted Secondary structure
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		212
Predicted Secondary structure
Query SS confidence
Query Sequence		R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		200

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions