Job Description A4UR78 Confidence 55.90% Date Thu Jan 5 10:55:06 GMT 2012 Rank 422 Aligned Residues 85 % Identity 8% Template c1wsuA_ PDB info PDB header:translation/rna Chain: A: PDB Molecule:selenocysteine-specific elongation factor; PDBTitle: c-terminal domain of elongation factor selb complexed with2 secis rna Resolution 2.30 Å

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		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220							.	.	.	.	.	.	.	.	.	230	.	.	.	.					.	.
Predicted Secondary structure																																																								.	.	.	.	.	.															.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.															.	.	.	.
Query Sequence		I	D	D	V	P	Q	W	L	K	S	T	V	E	K	M	H	D	K	E	Q	F	S	E	S	A	L	E	N	M	V	A	L	S	A	K	S	Q	E	Y	L	T	R	A	T	Q	R	Y	Y	G	K	T	P	M	Q	.	.	.	.	.	.	I	I	N	E	I	R	I	N	F	A	K	K	Q	L	.	.	.	.	E	M
Query Conservation																																																								.	.	.	.	.	.															.	.	.	.
Alig confidence																																																								.	.	.	.	.	.															.	.	.	.
Template Conservation
Template Sequence		G	S	E	T	Q	K	K	L	L	K	D	L	E	D	K	Y	R	V	S	R	W	Q	P	P	S	F	K	E	V	A	G	S	F	N	L	D	P	S	E	L	E	E	L	L	H	Y	L	V	R	E	G	V	L	V	K	I	N	D	E	F	Y	W	H	R	Q	A	L	G	E	A	R	E	V	I	K	N	L	A	S	T
Template Known Secondary structure				S	S																T	T	S			B									T																T	T	S					S	S	S	B																		G	G	G
Template Predicted Secondary structure
Template SS confidence
		511	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	Y	S	V	T	D	I	A	F	E	A	G	Y	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	P	F	G	L	A	E	A	R	D	A	L	G	S	S
Template Known Secondary structure		S		B										T
Template Predicted Secondary structure
Template SS confidence
		591	.	.	.	.	.	.	.	.	600	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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