Job Description P27848 Confidence 99.50% Date Thu Jan 5 11:44:21 GMT 2012 Rank 53 Aligned Residues 217 % Identity 13% Template d2c4na1 SCOP info HAD-like HAD-like NagD-like Resolution 1.8

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Y	Q	V	V	A	S	D	L	D	G	T	L	L	S	P	D	H	T	L	S	P	Y	A	K	E	T	L	K	L	L	T	A	R	G	I	N	F	V	F	A	T	G	R	H	H	V	D	V	G	Q	I	R	D	N	L	E	I	K	S	Y	M	I	T	S	N	G	A	R	V	H	D	L	D	G	N	L	I	F	A
Query Conservation
Alig confidence																						.																																																		.	.	.	.	.	.	.	.	.	.
Template Conservation																						.																																																		.	.	.	.	.	.	.	.	.	.
Template Sequence		T	I	K	N	V	I	C	D	I	D	G	V	L	M	H	D	N	V	A	V	.	P	G	A	A	E	F	L	H	G	I	M	D	K	G	L	P	L	V	L	L	T	N	Y	P	S	Q	T	G	Q	D	L	A	N	R	F	A	T	A	G	V	D	V	P	D	S	V	F	Y	T	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											B	T	T	T			T	T				.	T	T											T	T								S			S													T	T					G	G	G				.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																						.																																																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		H	N	L	D	R	D	I	A	S	D	L	F	G	V	V	N	D	N	P	D	I	I	T	N	V	Y	R	D	D	E	W	F	M	N	R	H	R	P	E	E	M	R	F	F	K	E	A	V	F	Q	Y	A	L	Y	E	P	G	L	L	E	P	E	G	V	S	K	V	F	F	T	C	D	S	H	E	Q	L	L	P	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.														.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.														.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	S	A	M	A	T	A	D	F	L	R	R	Q	E	.	.	.	.	.	.	.	.	G	K	K	A	Y	V	V	G	E	G	A	L	I	H	E	L	Y	K	A	G	F	.	.	.	.	.	.	.	.	T	I	T	D	V	N	P	D	F	V	I	V	G	E	T	R	S	Y	N	W	D	M	M
Template Known Secondary structure		.	.	.	.	.	.	.											T	S	S	.	.	.	.	.	.	.	.										T									T	T		.	.	.	.	.	.	.	.				S	S	S		S								T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.														.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.
Template SS confidence
									71	.	.	.	.	.	.	.	.	80	.	.	.									.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.									.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.																					.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.
Query Sequence		E	Q	A	I	N	A	R	W	G	D	R	V	N	V	S	F	S	T	L	T	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	V	M	A	G	G	V	S	K	G	H	A	L	E	A	V	A	K	K	L	G	Y	S	L	K	D	C	I	A	F	G	D	G	.	M	N	D	A
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.
Template Conservation
Template Sequence		H	K	A	A	Y	F	V	A	N	G	A	R	F	I	A	T	N	P	D	T	H	G	R	G	F	Y	P	A	C	G	A	L	C	A	G	I	E	K	I	S	G	R	K	P	F	Y	V	G	K	P	S	P	W	I	I	R	A	A	L	N	K	M	Q	A	H	S	E	E	T	V	I	V	G	D	N	L	R	T	D	I
Template Known Secondary structure										T	T						S				S	B	S	S	T	T		B																					S	T	T	S	T											T			G	G	G						S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		220	.	.	.	.	.	.	.								.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.
Query Sequence		E	M	L	S	M	A	G	K	.	.	.	.	.	.	.	G	C	I	M	G	S	A	H	Q	R	L	K	D	L	H	P	E	L	E	V	I	G	T	N	A	D
Query Conservation										.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.																	.	.
Template Conservation																																	.	.
Template Sequence		L	A	G	F	Q	A	G	L	E	T	I	L	V	L	S	G	V	S	S	L	D	D	I	D	S	M	P	F	R	P	S	.	.	W	I	Y	P	S	V	A	E
Template Known Secondary structure							T	T							S	S	S	S			G	G	G	G	S	S		S	S			S	.	.				S	S	G	G	G
Template Predicted Secondary structure																																	.	.
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.			.	240	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions