Job Description P27848 Confidence 99.71% Date Thu Jan 5 11:44:21 GMT 2012 Rank 46 Aligned Residues 218 % Identity 15% Template d1wvia_ SCOP info HAD-like HAD-like NagD-like Resolution 2.30

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Q	V	V	A	S	D	L	D	G	T	L	L	S	P	D	H	T	L	S	P	Y	A	K	E	T	L	K	L	L	T	A	R	G	I	N	F	V	F	A	T	G	R	H	H	V	D	V	G	Q	I	R	D	N	L	E	I	K	S	Y	M	I	T	S	N	G	A	R	V	H	D	L	D	G	N	L	I	F	A	H
Query Conservation
Alig confidence																					.																																																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.																																																		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	K	G	Y	L	I	D	L	D	G	T	I	Y	K	G	K	D	R	I	.	P	A	G	E	D	F	V	K	R	L	Q	E	R	Q	L	P	Y	I	L	V	T	N	N	T	T	R	T	P	E	M	V	Q	E	M	L	A	T	S	F	N	I	K	T	P	L	E	T	I	Y	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										B	T	T	T			T	T				.														T											S	S														S					G	G	G			.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																					.																																																		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1003	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.		.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	D	R	D	I	A	S	D	L	F	G	V	V	N	D	N	P	D	I	I	T	N	V	Y	R	D	D	E	W	F	M	N	R	H	R	P	E	E	M	R	F	F	K	E	A	V	F	Q	Y	A	L	Y	E	P	G	L	L	E	P	E	G	V	S	K	V	F	F	T	C	D	S	H	E	Q	L	L	P	L	E
Query Conservation
Alig confidence		.																	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Template Conservation		.																	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Template Sequence		.	T	A	T	L	A	T	I	D	Y	M	N	D	M	K	R	G	.	.	.	.	.	.	.	.	.	.	K	T	A	Y	V	I	G	E	T	G	L	K	K	A	V	A	E	A	G	.	.	.	.	.	.	.	.	.	Y	R	E	D	S	E	N	P	A	Y	V	V	V	G	L	D	T	N	L	T	Y	E	K	L	T
Template Known Secondary structure		.																	.	.	.	.	.	.	.	.	.	.	S						S											T	T	.	.	.	.	.	.	.	.	.					S	S	S		S								T	T
Template Predicted Secondary structure		.																	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Template SS confidence
			1071	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.											.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.										.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.																								.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.
Query Sequence		Q	A	I	N	A	R	W	G	D	R	V	N	V	S	F	S	T	L	T	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	V	M	A	G	G	V	S	K	G	H	A	L	E	A	V	A	K	K	L	G	Y	S	L	K	D	C	I	A	F	G	D	G	M	.	N
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.
Template Conservation
Template Sequence		L	A	T	L	A	I	Q	K	G	A	V	F	I	G	T	N	P	D	L	N	I	P	T	E	R	G	L	L	P	G	A	G	A	I	L	F	L	L	E	K	A	T	R	V	K	P	I	I	I	G	K	P	E	A	V	I	M	N	K	A	L	D	R	L	G	V	K	R	H	E	A	I	M	V	G	D	N	Y	L	T
Template Known Secondary structure									T	T						S				S					T	T																									S	T	T	S												T	S		G	G	G						S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		1131	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210
		218	.	220	.	.	.	.	.	.	.								.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.
Query Sequence		D	A	E	M	L	S	M	A	G	K	.	.	.	.	.	.	.	G	C	I	M	G	S	A	H	Q	R	L	K	D	L	H	P	E	L	E	V	I	G	T	N	A	D
Query Conservation												.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.																	.	.
Template Conservation																																			.	.
Template Sequence		D	I	T	A	G	I	K	N	D	I	A	T	L	L	V	T	T	G	F	T	K	P	E	E	V	P	A	L	P	I	Q	P	D	.	.	F	V	L	S	S	L	A	E
Template Known Secondary structure		T							T	T							S	S	S	S	S		T	T	T	G	G	G		S	S			S	.	.				S		G	G	G
Template Predicted Secondary structure																																			.	.
Template SS confidence
		1211	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.			.	.	.	.	.	.	1250	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions