Job Description P27848 Confidence 99.49% Date Thu Jan 5 11:44:21 GMT 2012 Rank 54 Aligned Residues 225 % Identity 15% Template d1vjra_ SCOP info HAD-like HAD-like NagD-like Resolution 2.40

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Q	V	V	A	S	D	L	D	G	T	L	L	S	P	D	H	T	L	S	P	Y	A	K	E	T	L	K	L	L	T	A	R	G	I	N	F	V	F	A	T	G	R	H	H	V	D	V	G	Q	I	R	D	N	L	E	I	K	S	Y	M	I	T	S	N	G	A	R	V	H	D	L	D	G	N	L	I	F	A	H
Query Conservation
Alig confidence																						.																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	E	L	F	I	L	D	X	D	G	T	F	Y	L	D	D	S	L	L	P	.	G	S	L	E	F	L	E	T	L	K	E	K	N	K	R	F	V	F	F	T	N	N	S	S	L	G	A	Q	D	Y	V	R	K	L	R	N	X	G	V	D	V	P	D	D	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										B	T	T	T			T	T				T	.	T											T	T								S		T	T	S												T	T					G	G	G		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																						.																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	D	R	D	I	A	S	D	L	F	G	V	V	N	D	N	P	D	I	I	T	N	V	Y	R	D	D	E	W	F	M	N	R	H	R	P	E	E	M	R	F	F	K	E	A	V	F	Q	Y	A	L	Y	E	P	G	L	L	E	P	E	G	V	S	K	V	F	F	T	C	D	S	H	E	Q	L	L	P	L	E
Query Conservation
Alig confidence		.																	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.
Template Conservation		.																	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.
Template Sequence		.	V	T	S	G	E	I	T	A	E	H	X	L	K	R	F	G	.	.	.	.	.	.	.	.	.	.	R	C	R	I	F	L	L	G	T	P	Q	L	K	K	V	F	E	A	Y	G	H	.	.	.	.	.	.	.	.	V	I	D	E	E	N	P	D	F	V	V	L	G	F	D	K	T	L	T	Y	E	R	L	K
Template Known Secondary structure		.																	.	.	.	.	.	.	.	.	.	.	S							S											T	T		.	.	.	.	.	.	.	.				S	S	S		S								T	T
Template Predicted Secondary structure		.																	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.
Template SS confidence
			71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.											.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.									.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.																									.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.
Query Sequence		Q	A	I	N	A	R	W	G	D	R	V	N	V	S	F	S	T	L	T	C	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	V	M	A	G	G	V	S	K	G	H	A	L	E	A	V	A	K	K	L	G	Y	S	L	K	D	C	I	A	F	G	D	G	M	.
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.
Template Conservation
Template Sequence		K	A	C	I	L	L	R	K	G	K	F	Y	I	A	T	H	P	D	I	N	C	P	S	K	E	G	P	V	P	D	A	G	S	I	X	A	A	I	E	A	S	T	G	R	K	P	D	L	I	A	G	K	P	N	P	L	V	V	D	V	I	S	E	K	F	G	V	P	K	E	R	X	A	X	V	G	D	R	L	Y
Template Known Secondary structure								T	T	T						S				S					T	T	S																	S				S				S	T	T	S	T											T			G	G	G						S
Template Predicted Secondary structure
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.				.	.	.	.	.	.	.	.	240	.	.	.	.	.			.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure																	.	.	.															.	.
Query SS confidence																	.	.	.															.	.
Query Sequence		N	D	A	E	M	L	S	M	A	G	K	G	C	I	M	.	.	.	G	S	A	H	Q	R	L	K	D	L	H	P	E	L	.	.	E	V	I	G	T	N	A	D	D	A	V	P	H	Y	L	R
Query Conservation																	.	.	.															.	.
Alig confidence																	.	.	.															.	.									.	.
Template Conservation																																												.	.
Template Sequence		T	D	V	K	L	G	K	N	A	G	I	V	S	I	L	V	L	T	G	E	T	T	P	E	D	L	E	R	A	E	T	K	P	D	F	V	F	K	N	L	G	E	.	.	L	A	K	A	V	Q
Template Known Secondary structure											T							S	S	S	S										S	S			S				S	S				.	.
Template Predicted Secondary structure																																												.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.			.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions