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Job DescriptionP27848
Confidence98.36%DateThu Jan 5 11:44:21 GMT 2012
Rank118Aligned Residues220
% Identity14%Templatec3k1zA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:haloacid dehalogenase-like hydrolase domain-containing PDBTitle: crystal structure of human haloacid dehalogenase-like hydrolase domain2 containing 3 (hdhd3)
Resolution1.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  QVVASDLDGTLLSPDHTLSPYAKETLKLLTARGINFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDLDGNLIFAHN
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Template Sequence  RLLTWDVKDTLLRLRHPLGEAYATKARAH. . . GLEV. . . . . . EPSALEQGFRQ. . . . . . . . . AYRAQSHSFPNYGLSHGL
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BTTTSS
T...T


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.........STGGGGGGT
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   8.10.........20.........30...... ...40 .........50. ........60.........
 
   83......90.........100.........110.........120....... ..130.........140.........150
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Query Sequence  LDRDIASDLFGVVNDNPDIITNVYRDDEWFMNRHRPEEMRFFKEA. . . . . . . . . . . . VFQYALYEPGLLEPEGVSKVFFT
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Template Sequence  TSRQWWLDVVLQTFHLAGV. . . . . . . . . . . . . . QDAQAVAPIAEQLYKDFSHPCTWQVLDGAEDTLRECRTRGLRLAVIS
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TTSGGG
TTTT
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   70.........80........ .90.........100.........110.........120.........130.....
 
   151........160.........170.........180.........190.........200.........210..... ....220....... .
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Query Sequence  CDSHEQLLPLEQAINARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDG. MNDAEMLSMAGK. G
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Template Sequence  NFDRRLEGILGGLGLREHFDFVLTSEAA. . . . . . . GWPKPDPRIFQEALRLAHXEPVVAAHVGDNYLCDYQGPRAVGXHS
Template Known Secondary structure  S

TTTT
GGG
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TTST

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TTTT
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   136...140.........150.........160... ......170.........180.........190.........200........
 
   229230. ........240.........250.........260...
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Query Sequence  CIM. . . GSAHQRLKDLHPELEVIGTNADDAVPHYLRKL
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Template Sequence  FLVVGPQALDPVVRDSVPKEHILPSLAH. . LLPALDCL
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SS


S
GGGSSGGG..
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   209210.........220.........230...... ...240....
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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