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Job DescriptionP27848
Confidence100.00%DateThu Jan 5 11:44:21 GMT 2012
Rank15Aligned Residues242
% Identity16%Templatec3gygA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:ntd biosynthesis operon putative hydrolase ntdb; PDBTitle: crystal structure of yhjk (haloacid dehalogenase-like hydrolase2 protein) from bacillus subtilis
Resolution2.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20 .........30. ........40.........50.........60. ........70..
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Query Sequence  YQVVASDLDGTLLSPDHTL. SPYAKETLKLL. . . . . TARGINFVFATGRHHVDVGQIRDNLEIKSY. . . MITSNGARVHD
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Template Sequence  QYIVFCDFDETYFPHTIDEQKQQDIYELEDYLEQKSKDGELIIGWVTGSSIESILDKXGRGKFRYFPHFIASDLGTEITY
Template Known Secondary structure  STBTTTB
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TT

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   1920.........30.........40.........50.........60.........70.........80.........90........
 
   73 ......80.........90.........100.........110.........120.........130.........140.........150.
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Query Sequence  L. DGNLIFAHNLDRDIASDLFGVVNDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFQYALYEPGLLEPEGVSKVFFTC
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Template Sequence  FSEHNFGQQDNKWNSRINEGFSKEKVE. . . . . . . . . . . . . . . . . . . KLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQ
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SSSTT
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GGGT
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   99100.........110.........120..... ....130.........140.........150.........
 
   152.......160.........170...... ...180.........190.........200.........210.........220.
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Query Sequence  DSHEQLLPLEQAINARWGDRVNVSF. . . . . . . . . . STLTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEM
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Template Sequence  DEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDPEDSYDVDFIPIGTGKNEIVTFXLEKYNLNTERAIAFGDSGNDVRX
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   160.........170.........180.........190.........200.........210.........220.........230.........
 
   222.......230.........240.........250.........260....
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Query Sequence  LSMAGKGCIMGSAHQRLKDLHPELEVIGTNADDAVPHYLRKLY
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Template Sequence  LQTVGNGYLLKNATQEAKNLHN. . LITDSEYSKGITNTLKKLI
Template Known Secondary structure  TTSS
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   240.........250.........260. ........270.........280
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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