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Job DescriptionP27848
Confidence84.16%DateThu Jan 5 11:44:21 GMT 2012
Rank154Aligned Residues54
% Identity17%Templatec3ef0A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:rna polymerase ii subunit a c-terminal domain PDBTitle: the structure of fcp1, an essential rna polymerase ii ctd2 phosphatase
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3. .....10......... 20.........30.........40.
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Query Sequence  QV. VASDLDGTLLSPDHT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LSPYAKETLKLLTARGINFVFA
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Template Sequence  RLSLIVDLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKFRPGLAQFLQKISEL. YELHIY
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BTTT

TT
TTSTTTGGGTT
TTTT
TTTT.
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   164.....170.........180.........190.........200.........210.........220.........230...... ...240..
 
   42.......50.......
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Query Sequence  TGRHHVDVGQIRDNLE
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Template Sequence  TMGTKAYAKEVAKIID
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   243......250........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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