Job Description P27848 Confidence 97.90% Date Thu Jan 5 11:44:21 GMT 2012 Rank 134 Aligned Residues 222 % Identity 11% Template c3ed5A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:yfnb; PDBTitle: the crystal structure of yfnb from bacillus subtilis subsp. subtilis2 str. 168 Resolution 1.72 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Q	V	V	A	S	D	L	D	G	T	L	L	S	P	D	H	T	L	S	P	Y	A	K	E	T	L	K	L	L	T	A	R	G	I	N	F	V	F	A	T	G	R	H	H	V	D	V	G	Q	I	R	D	N	L	E	I	K	S	Y	M	I	T	S	N	G	A	R	V	H	D	L	D	G	N	L	I	F	A	H
Query Conservation
Alig confidence																																.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	R	T	L	L	F	D	V	D	D	T	I	L	D	F	Q	A	A	E	A	L	A	L	R	L	L	F	E	D	Q	.	.	.	N	I	P	L	T	N	D	X	K	A	Q	Y	K	T	I	N	Q	G	L	W	R	A	F	E	E	G	K	X	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										B	T	T	T	B																	T	.	.	.	T																								T	T	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.				.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	D	R	D	I	A	S	D	L	F	G	V	V	N	D	N	P	D	I	I	T	N	V	Y	R	D	D	E	W	F	M	N	R	H	R	P	E	E	M	R	F	F	K	E	A	V	F	Q	Y	A	L	Y	E	P	G	L	L	E	P	E	G	V	S	K	V	F	F	T	C	D	S	H	E	Q	L	L	P	L	E
Query Conservation
Alig confidence		.																			.	.	.	.	.	.	.	.
Template Conservation		.																			.	.	.	.	.	.	.	.
Template Sequence		.	T	R	D	E	V	V	N	T	R	F	S	A	L	L	K	E	Y	G	.	.	.	.	.	.	.	.	Y	E	A	D	G	A	L	L	E	Q	K	Y	R	R	F	L	E	E	G	H	Q	L	I	D	G	A	F	D	L	I	S	N	L	Q	Q	Q	F	D	L	Y	I	V	T	N	G	V	S	H	T	Q	Y	K	R
Template Known Secondary structure		.																	T	T	.	.	.	.	.	.	.	.																	T	T				B		T	T										T	T	S								S
Template Predicted Secondary structure		.																			.	.	.	.	.	.	.	.
Template SS confidence
			62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.									80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.														.													.
Query SS confidence																																											.														.													.
Query Sequence		Q	A	I	N	A	R	W	G	D	R	V	N	V	S	F	S	T	L	T	C	L	E	V	M	A	G	G	V	S	K	G	H	A	L	E	A	V	A	K	K	L	.	G	Y	S	L	K	D	C	I	A	F	G	D	G	.	M	N	D	A	E	M	L	S	M	A	G	K	.	G	C	I	M	G	S	A	H	Q	R	L
Query Conservation																																											.														.													.
Alig confidence																			.	.	.	.	.																				.														.													.
Template Conservation																			.	.	.	.	.
Template Sequence		L	R	D	S	G	L	F	P	F	F	K	D	I	F	V	S	E	.	.	.	.	.	D	T	G	F	Q	K	P	X	K	E	Y	F	N	Y	V	F	E	R	I	P	Q	F	S	A	E	H	T	L	I	I	G	D	S	L	T	A	D	I	K	G	G	Q	L	A	G	L	D	T	C	W	X	N	P	D	X	K	P	N
Template Known Secondary structure					T	T		G	G	G		S					G	G	.	.	.	.	.	G	T	T	S		T	T											T	S	T	T			G	G	G						S		T	T	T	T							T	T								T	T
Template Predicted Secondary structure																			.	.	.	.	.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.						150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	D	L	H	P	E	L	E	V	I	G	T	N	A	D	D	A	V	P	H	Y	L	R
Query Conservation
Alig confidence																	.	.
Template Conservation																	.	.
Template Sequence		V	P	E	I	I	P	T	Y	E	I	R	K	L	E	E	.	.	L	Y	H	I	L	N
Template Known Secondary structure		T	T					S				S	S	G	G	G	.	.						T
Template Predicted Secondary structure																	.	.
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.			.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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