Return to main results Retrieve Phyre Job Id

Job DescriptionP27848
Confidence99.13%DateThu Jan 5 11:44:21 GMT 2012
Rank65Aligned Residues149
% Identity21%Templatec3b9bA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:sarcoplasmic/endoplasmic reticulum calcium PDBTitle: structure of the e2 beryllium fluoride complex of the serca2 ca2+-atpase
Resolution2.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   18.20.........30.........40.........50.........60.........70.........80.........90.......
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  HTLSPYAKETLKLLTARGINFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDLDGNLIFAHNLDRDIASDLFGVVND
Query Conservation    
       
  
   
      


                  
   

 
            
       
      
Alig confidence 



























































.....











...
Template Conservation 
 

      
  
  


 
 




   

  

   

             
     .....
           ...
Template Sequence  DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDD. . . . . LPLAEQREACRR. . .
Template Known Secondary structure 

B
TTTT

SS
TSS
TT


TTT.....S
...
Template Predicted Secondary structure 
























.....


...
Template SS confidence 















































































   601........610.........620.........630.........640.........650.........660 .........670..
 
   98.100.........110.........120.........130.........140.........150.........160.........170.......
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  NPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFQYALYEPGLLEPEGVSKVFFTCDSHEQLLPLEQAINARWGDRVNVSFS
Query Conservation                                                                    
             
Template Conservation  ................................................................................
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  ................................................................................
Template Predicted Secondary structure  ................................................................................
Template SS confidence 















































































  
 
   178.180.........190.........200.........210.........220.........230.........240.........250.......
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  TLTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGSAHQRLKDLHPELEVIGTNADDAVP
Query Conservation      


      
  

  
     
    
   


 


 

  

  


 

    
  
            

 
Alig confidence 









..













....



































..











Template Conservation    



 

 .. 
  

  

  
 .... 
 




 

  

  





   

  
  


..


       
 
Template Sequence  ACCFARVEPS. . HKSKIVEYLQSYDE. . . . ITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKTASE. . MVLADDNFSTIV
Template Known Secondary structure 

S

..TTT
....

STTSSSTTS

S..TT

T
Template Predicted Secondary structure 




..


....










..


Template SS confidence 















































































   673......680.. .......690...... ...700.........710.........720.........730.. .......740....
 
   258.260..
Predicted Secondary structure 
Query SS confidence 




Query Sequence  HYLRK
Query Conservation    
  
Alig confidence 




Template Conservation    
  
Template Sequence  AAVEE
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 




   745....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions