Job Description P27848 Confidence 98.13% Date Thu Jan 5 11:44:21 GMT 2012 Rank 127 Aligned Residues 198 % Identity 10% Template c2w11B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:2-haloalkanoic acid dehalogenase; PDBTitle: structure of the l-2-haloacid dehalogenase from sulfolobus2 tokodaii Resolution 1.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Q	V	V	A	S	D	L	D	G	T	L	L	S	P	D	H	T	L	S	P	Y	A	K	E	T	L	K	L	L	T	A	R	G	I	N	F	V	F	A	T	G	R	H	H	V	D	V	G	Q	I	R	D	N	L	E	I	K	S	Y	M	I	T	S	N	G	A	R	V	H	D	L	D	G	N	L	I	F	A	H
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	I	I	L	A	F	D	I	F	G	T	V	L	D	T	S	T	V	I	Q	E	F	R	N	K	Q	L	E	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	W	L	L	T	I	M	G	K	Y	V	E	F	E
Template Known Secondary structure										B	T	T	T	B			T	T	S												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.																																						30	.	.	.	.	.	.	.	.	.	40	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	D	R	D	I	A	S	D	L	F	G	V	V	N	D	N	P	D	I	I	T	N	V	Y	R	D	D	E	W	F	M	N	R	H	R	P	E	E	M	R	F	F	K	E	A	V	F	Q	Y	A	L	Y	E	P	G	L	L	E	P	E	G	V	S	K	V	F	F	T	C	D	S	H	E	Q	L	L	P	L	E
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	I	T	K	I	T	L	R	Y	I	L	K	V	R	G	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	K	F	D	E	E	L	N	K	W	K	N	L	K	A	Y	E	D	T	K	Y	L	K	E	I	S	E	I	A	E	V	Y	A	L	S	N	G	S	I	N	E	V	K	Q	H	L
Template Known Secondary structure															T	T		G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G										T			B		G	G	G	G	G								S							S	S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60																		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.		.
Predicted Secondary structure																																																																				.												.
Query SS confidence																																																																				.												.
Query Sequence		Q	A	I	N	A	R	W	G	D	R	V	N	V	S	F	S	T	L	T	C	L	E	V	M	A	G	G	V	S	K	G	H	A	L	E	A	V	A	K	K	L	G	Y	S	L	K	D	C	I	A	F	G	D	G	M	N	D	A	E	M	L	S	M	A	G	K	.	G	C	I	M	G	S	A	H	Q	R	L	.	K
Query Conservation																																																																				.												.
Alig confidence									.	.	.	.	.	.	.	.																																																				.												.
Template Conservation									.	.	.	.	.	.	.	.
Template Sequence		E	R	N	G	L	L	R	.	.	.	.	.	.	.	.	Y	F	K	G	I	F	S	A	E	S	V	K	E	Y	K	P	S	P	K	V	Y	K	Y	F	L	D	S	I	G	A	K	E	A	F	L	V	S	S	N	A	F	D	V	I	G	A	K	N	A	G	M	R	S	I	F	V	N	R	K	N	T	I	V	D	P
Template Known Secondary structure				T	T		G	G	.	.	.	.	.	.	.	.	G		S					G	G	G	G	T			T	T													T		S	S						S											T	T								S	S						G
Template Predicted Secondary structure									.	.	.	.	.	.	.	.
Template SS confidence
		107	.	.	110	.	.	.									.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	H	P	E	L	E	V	I	G	T	N	A	D	D	A	V	P	H	Y	L	R	K	L
Query Conservation
Alig confidence																.	.
Template Conservation																.	.
Template Sequence		I	G	G	K	P	D	V	I	V	N	D	F	K	E	.	.	L	Y	E	W	I	L	R	Y
Template Known Secondary structure		G	G				S				S	S				.	.
Template Predicted Secondary structure																.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.			.	.	.	.	.	.	.	200

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions