Job Description P27848 Confidence 99.60% Date Thu Jan 5 11:44:21 GMT 2012 Rank 51 Aligned Residues 234 % Identity 17% Template c1zjjA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:hypothetical protein ph1952; PDBTitle: crystal structure of hypothetical protein ph1952 from pyrococcus2 horikoshii ot3 Resolution 1.85 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Q	V	V	A	S	D	L	D	G	T	L	L	S	P	D	H	T	L	S	P	Y	A	K	E	T	L	K	L	L	T	A	R	G	I	N	F	V	F	A	T	G	R	H	H	V	D	V	G	Q	I	R	D	N	L	E	I	K	S	Y	M	I	T	S	N	G	A	R	V	H	D	L	D	G	N	L	I	F	A	H
Query Conservation
Alig confidence																					.																																																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.																																																		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	V	A	I	I	F	D	M	D	G	V	L	Y	R	G	N	R	A	I	.	P	G	V	R	E	L	I	E	F	L	K	E	R	G	I	P	F	A	F	L	T	N	N	S	T	K	T	P	E	M	Y	R	E	K	L	L	K	M	G	I	D	V	S	S	S	I	I	I	T	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										B	T	T	T			T	T				.	T	T												T								S			S	S											T	T	T					G	G	G				.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																					.																																																		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	D	R	D	I	A	S	D	L	F	G	V	V	N	D	N	P	D	I	I	T	N	V	Y	R	D	D	E	W	F	M	N	R	H	R	P	E	E	M	R	F	F	K	E	A	V	F	Q	Y	A	L	Y	E	P	G	L	L	E	P	E	G	V	S	K	V	F	F	T	C	D	S	H	E	Q	L	L	P	L	E
Query Conservation
Alig confidence		.	.																.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.																.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	S	G	L	A	T	R	L	Y	M	S	K	H	L	D	P	.	.	.	.	.	.	.	.	.	.	G	K	I	F	V	I	G	G	E	G	L	V	K	E	M	Q	A	L	G	W	G	I	V	T	L	D	E	A	R	Q	G	S	W	K	E	V	K	H	V	V	V	G	L	D	P	D	L	T	Y	E	K	L	K
Template Known Secondary structure		.	.													S			.	.	.	.	.	.	.	.	.	.							S												T	S		B								T	T	G	G	G	G										T	T
Template Predicted Secondary structure		.	.																.	.	.	.	.	.	.	.	.	.
Template SS confidence
				69	70	.	.	.	.	.	.	.	.	.	80	.	.	.											.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.																						.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.
Query Sequence		Q	A	I	N	A	R	W	G	D	R	V	N	V	S	F	S	T	L	T	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	V	M	A	G	G	V	S	K	G	H	A	L	E	A	V	A	K	K	L	G	Y	S	L	K	D	C	I	A	F	G	D	G	.	M	N	D	A
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.
Template Conservation
Template Sequence		Y	A	T	L	A	I	R	N	G	A	T	F	I	G	T	N	P	D	A	T	L	P	G	E	E	G	I	Y	P	G	A	G	S	I	I	A	A	L	K	V	A	T	N	V	E	P	I	I	I	G	K	P	N	E	P	M	Y	E	V	V	R	E	M	F	P	G	E	E	L	W	M	V	G	D	R	L	D	T	D	I
Template Known Secondary structure									T	T						S				S					T	T																									S	T	T	S											S	T	T								S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		220	.	.	.	.	.	.	.	.	.	230	.				.	.	.	.	.	.	.	.	240	.	.	.			.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure														.	.	.													.	.
Query SS confidence														.	.	.													.	.
Query Sequence		E	M	L	S	M	A	G	K	G	C	I	M	.	.	.	G	S	A	H	Q	R	L	K	D	L	H	P	.	.	E	L	E	V	I	G	T	N	A	D	D	A	V	P	H	Y	L	R
Query Conservation														.	.	.													.	.
Alig confidence														.	.	.													.	.											.	.
Template Conservation																																									.	.
Template Sequence		A	F	A	K	K	F	G	M	K	A	I	M	V	L	T	G	V	S	S	L	E	D	I	K	K	S	E	Y	K	P	D	L	V	L	P	S	V	Y	E	.	.	L	I	D	Y	L	K
Template Known Secondary structure							T	T							S	S	S	S							T	T		S	S			S				S	S	G	G	G	.	.	G	G	G	G	G
Template Predicted Secondary structure																																									.	.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.			.	.	.	.	260	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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