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Job Description | P27848 | Confidence | 97.39% | Date | Thu Jan 5 11:44:21 GMT 2012 |
Rank | 138 | Aligned Residues | 65 |
% Identity | 28% | Template | c1yj5B_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:5' polynucleotide kinase-3' phosphatase catalytic domain; |
PDBTitle: molecular architecture of mammalian polynucleotide kinase, a dna2 repair enzyme
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Resolution | 2.80 Å |
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Query Sequence |   |
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H | V | D | V | G | Q | I | R | D | N | L | E | I |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
K | V | A | A | F | D | L | D | G | T | L | I | T | T | R | S | G | K | V | F | P | T | S | P | S | D | W | R | I | L | Y | P | E | I | P | K | K | L | Q | E | L | A | A | E | G | Y | K | L | V | I | F | T | N | Q | X | G | I | G | R | G | K | L | P | A | E | V | F | K | G | K | V | E | A | V | L | E | K | L | G | V |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
165 | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . |
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59 | 60 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
K | S | Y | M | I | T | S | N | G |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
P | F | Q | V | L | V | A | T | H |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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245 | . | . | . | . | 250 | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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