Job Description P77396 Confidence 88.62% Date Thu Jan 5 12:28:33 GMT 2012 Rank 270 Aligned Residues 72 % Identity 18% Template c3uyjA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:lysine-specific demethylase 8; PDBTitle: crystal structure of jmjd5 catalytic core domain in complex with2 nickle and alpha-kg Resolution 2.35 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.																																		.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	V	W	F	A	S	Q	P	A	S	L	P	V	G	S	L	C	I	D	F	P	R	L	D	I	V	L	R	G	E	Y	G	N	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	K	Q	Q	R	L	V	E	G	E	M
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	I	N	A	W	F	G	P	Q	G	T	I	S	P	L	H	Q	D	P	Q	Q	N	F	L	V	Q	V	M	G	R	K	Y	I	R	L	Y	S	P	Q	E	S	G	A	L	Y	P	H	N	T	S	Q	V	D	V	E	N	P	D	L	E	K	F	P	K	F	A	K	A	P	F	L	S	C	I	L	S	P	G	E	I
Template Known Secondary structure										T	T									S	S									S									G	G	G	G	G	G	G		B			B	B	S	S		T	T	S			T	T	T		T	T	S	T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	I	P	A	R	A	A	N	L	P	V	N	N	K	P	V	M	L	L	S	L	V	F	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	F	I	P	V	K	Y	W	H	Y	V	R	A	L	D	L	S	F	S	V	S	F	W	W	S
Template Known Secondary structure						T	T								S	S	S
Template Predicted Secondary structure
Template SS confidence
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions