Job Description P77396 Confidence 68.72% Date Thu Jan 5 12:28:33 GMT 2012 Rank 415 Aligned Residues 154 % Identity 10% Template c3la2A_ PDB info PDB header:transcription Chain: A: PDB Molecule:global nitrogen regulator; PDBTitle: crystal structure of ntca in complex with 2-oxoglutarate Resolution 2.60 Å

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		62	.	.	.	.	.	.	.	70	.	.	.	.					.	.	.	.	.	80	.	.			.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure															.	.	.	.									.	.
Query SS confidence															.	.	.	.									.	.
Query Sequence		L	L	E	A	K	Q	Q	R	L	V	E	G	E	.	.	.	.	M	L	F	I	P	A	R	A	.	.	A	N	L	P	V	N	N	K	P	V	M	L	L	S	L	V	F	A	P	T	W	L	G	L	S	F	Y	D	S	R	T	T	S	L	L	H	P	A	R	Q	I	Q	L	P	S	L	Q	R	G	E	G	E	A
Query Conservation															.	.	.	.									.	.
Alig confidence															.	.	.	.									.	.
Template Conservation
Template Sequence		T	F	E	R	N	K	T	I	F	F	P	G	D	P	A	E	R	V	Y	F	L	L	K	G	A	V	K	L	S	R	V	Y	E	A	G	E	E	I	T	V	A	L	L	R	E	N	S	V	F	G	V	L	S	L	L	T	G	N	K	S	D	R	F	Y	H	A	V	A	F	T	P	V	E	L	L	S	A	P	I	E
Template Known Secondary structure					T	T						T	T	S	B										S									T	T	S										T	T					T					T	G	G	G	S	B								S	S	S
Template Predicted Secondary structure
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.											.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.	.
Query Sequence		M	L	T	A	L	T	H	L	S	R	S	P	L	E	Q	N	I	I	Q	P	L	V	L	S	L	L	H	L	C	R	S	V	V	N	M	P	P	G	N	S	Q	P	R	G	D	F	L	Y	H	S	I	C	N	W	V	Q	D	N	Y	.	.	.	.	.	.	.	.	.	.	A	Q	P	L	T	R	E	S	V	A	Q
Query Conservation																																																													.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.
Template Sequence		Q	V	E	Q	A	L	K	E	N	.	.	.	.	.	P	E	L	S	M	L	M	L	R	G	L	S	S	R	I	L	Q	T	E	M	M	I	E	T	L	A	H	R	D	M	G	S	R	L	V	S	F	L	L	I	L	C	R	D	F	G	V	P	C	A	D	G	I	T	I	D	L	K	L	S	H	Q	A	I	A	E
Template Known Secondary structure											.	.	.	.	.																												S	S																					S	S	S					S
Template Predicted Secondary structure											.	.	.	.	.
Template SS confidence
		107	.	.	110	.	.	.	.	.						.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		F	F	N	I	T	P	N	H	L	S	K	L	F	A	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	G	S	T	R	V	T	V	T	R	L	L	G	D
Template Known Secondary structure				T
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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