Return to main results Retrieve Phyre Job Id

Job DescriptionP77396
Confidence98.43%DateThu Jan 5 12:28:33 GMT 2012
Rank16Aligned Residues75
% Identity13%Templatec3ibmB_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:cupin 2, conserved barrel domain protein; PDBTitle: crystal structure of cupin 2 domain-containing protein hhal_0468 from2 halorhodospira halophila
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   23......30.........40.........50.........60.........70.........80.........90........
Predicted Secondary structure 






























Query SS confidence 











































































Query Sequence  NPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLV
Query Conservation                       
 
    
  
  
            
  
 
  
                    
Alig confidence 

















.
























































Template Conservation      
      
 

   .  
 
   
   

 
 
   
      
  

 
 

 
  
   
 
  


 

Template Sequence  EAPAFETRYFEVEPGGYT. TLERHEHTHVVMVVRGHAEVVLDDRVEPLTPLDCVYIAPHAWHQIHATGANEPLGFL
Template Known Secondary structure 
S
S
TT
B
.

BB
SS
S
TT
TT

TT



SSS
Template Predicted Secondary structure 








.





















Template SS confidence 











































































   50.........60....... ..70.........80.........90.........100.........110.........120....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions