Job Description P77396 Confidence 100.00% Date Thu Jan 5 12:28:33 GMT 2012 Rank 1 Aligned Residues 246 % Identity 11% Template c3gbgA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:tcp pilus virulence regulatory protein; PDBTitle: crystal structure of toxt from vibrio cholerae o395 Resolution 1.90 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.			.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.					.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																																						.	.																								.	.	.	.
Query SS confidence																																						.	.																								.	.	.	.
Query Sequence		V	W	F	A	S	Q	P	A	S	L	P	V	G	S	L	C	I	D	F	P	R	L	D	I	V	L	R	G	E	Y	G	N	L	L	E	A	.	.	K	Q	Q	R	L	V	E	G	E	M	L	F	I	P	A	R	A	A	N	L	P	V	N	.	.	.	.	N	K	P	V	M	L	L	S	L	V	F	A	P	T	W
Query Conservation																																						.	.																								.	.	.	.
Alig confidence																																						.	.																								.	.	.	.
Template Conservation
Template Sequence		V	Y	R	M	S	K	F	D	T	Y	I	F	N	N	L	Y	I	N	D	Y	K	M	F	W	I	D	S	G	I	A	K	L	I	D	K	N	C	L	V	S	Y	E	I	N	S	S	S	I	I	L	L	K	K	N	S	I	Q	R	F	S	L	T	S	L	S	D	E	N	I	N	V	S	V	I	T	I	S	D	S	F
Template Known Secondary structure							T	T											S	S							S	S	S							T	T	T	T							T	T							T	T												S	S
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	L	S	F	Y	D	S	R	T	T	S	L	L	H	P	A	R	Q	I	Q	L	P	S	L	Q	R	G	E	G	E	A	M	L	T	A	L	T	H	L	S	R	S	P	L	E	Q	N	I	I	Q	P	L	V	L	S	L	L	H	L	C	R	S	V	V	N	M	P	P	G	N	S	Q	P	R	G	D	F	L	Y
Query Conservation
Alig confidence								.	.	.	.	.	.																																																																	.	.	.
Template Conservation								.	.	.	.	.	.																																																																	.	.	.
Template Sequence		I	R	S	L	K	S	.	.	.	.	.	.	Y	I	L	G	N	K	D	L	L	L	W	N	C	E	H	N	D	I	A	V	L	S	E	V	V	N	G	F	R	E	I	N	Y	S	D	E	F	L	K	V	F	F	S	G	F	F	S	K	V	E	K	K	Y	N	S	I	F	I	T	D	D	L	D	A	.	.	.	M
Template Known Secondary structure								.	.	.	.	.	.															S	S										T	T	T	S	S																				T	T	T	S	S	S		S	S			T	T			.	.	.
Template Predicted Secondary structure								.	.	.	.	.	.																																																																	.	.	.
Template SS confidence
		91	.	.	.	.	.							.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160				.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	S	I	C	N	W	V	Q	D	N	Y	A	Q	P	L	T	R	E	S	V	A	Q	F	F	N	I	T	P	N	H	L	S	K	L	F	A	Q	H	G	T	M	R	F	I	E	Y	V	R	W	V	R	M	A	K	A	R	M	I	L	Q	K	Y	H	L	S	I	H	E	V	A	Q	R	C	G	F	P	D	S	D	Y
Query Conservation
Alig confidence																																							.
Template Conservation																																							.
Template Sequence		E	K	I	S	C	L	V	K	S	D	I	T	R	N	W	R	W	A	D	I	C	G	E	L	R	T	N	R	M	I	L	K	K	E	L	E	S	.	R	G	V	K	F	R	E	L	I	N	S	I	R	I	S	Y	S	I	S	L	M	K	T	G	E	F	K	I	K	Q	I	A	Y	Q	S	G	F	A	S	V	S	Y
Template Known Secondary structure											T	T	T	S												T												T	.	T	T																						T											T	T		S
Template Predicted Secondary structure																																							.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	C	R	V	F	R	R	Q	F	G	L	T	P	G	E	Y	S	A	R	F	Q	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	S	T	V	F	K	S	T	M	N	V	A	P	S	E	Y	L	F	M	L	T	G
Template Known Secondary structure											S	S									T	S
Template Predicted Secondary structure
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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