Job Description P77396 Confidence 90.53% Date Thu Jan 5 12:28:33 GMT 2012 Rank 231 Aligned Residues 88 % Identity 15% Template c3ejkA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:dtdp sugar isomerase; PDBTitle: crystal structure of dtdp sugar isomerase (yp_390184.1) from2 desulfovibrio desulfuricans g20 at 1.95 a resolution Resolution 1.95 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.												.	.	.	70	.	.	.				.	.	.
Predicted Secondary structure																																					.																					.	.	.	.	.	.	.	.	.	.	.								.	.	.
Query SS confidence																																					.																					.	.	.	.	.	.	.	.	.	.	.								.	.	.
Query Sequence		F	F	A	D	L	F	S	G	L	V	L	N	P	Q	L	L	G	R	V	W	F	A	S	Q	P	A	S	L	P	V	G	S	L	C	I	.	D	F	P	R	L	D	I	V	L	R	G	E	Y	G	N	L	L	E	A	K	.	.	.	.	.	.	.	.	.	.	.	Q	Q	R	L	V	E	G	.	.	.	E	M	L
Query Conservation																																					.																					.	.	.	.	.	.	.	.	.	.	.								.	.	.
Alig confidence																																					.																					.	.	.	.	.	.	.	.	.	.	.								.	.	.
Template Conservation
Template Sequence		P	V	L	H	X	L	R	L	D	S	P	Q	F	S	Q	F	G	E	I	Y	F	S	E	V	L	P	R	R	V	K	A	W	K	R	H	S	L	X	T	Q	L	F	A	V	P	V	G	C	I	H	V	V	L	Y	D	G	R	E	K	S	P	T	S	G	R	L	A	Q	V	T	L	G	R	P	D	N	Y	R	L	L
Template Known Secondary structure									T	T		T	T														B	T									S	S										S											T	T		T	T	T	T									T	T	T	B
Template Predicted Secondary structure
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	P	A	R	A	A	N	L	P	V	N	N	K	P	V	M	L	L	S	L	V	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	I	P	P	Q	V	W	Y	G	F	A	A	T	G	D	T	P	A	L	V	A	N	C
Template Known Secondary structure					T	T									T	T	S
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions