Return to main results Retrieve Phyre Job Id

Job DescriptionP77396
Confidence86.41%DateThu Jan 5 12:28:33 GMT 2012
Rank294Aligned Residues73
% Identity12%Templatec2zklA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:capsular polysaccharide synthesis enzyme cap5f; PDBTitle: crystal structure of capsular polysaccharide assembling protein capf2 from staphylococcus aureus
Resolution2.61 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40...... ...50.........60... ......70.... .....80.........90.......
Predicted Secondary structure 











.
....





....









Query SS confidence 



















.
















. . . .










. . . .






















Query Sequence  LGRVWFASQPASLPVGSLCI. DFPRLDIVLRGEYGNLL. . . . EAKQQRLVEGE. . . . MLFIPARAANLPVNNKPVMLLSL
Query Conservation                   
 
.    
  
  
      ....      
  
 ....
  
                   
Alig confidence 



















.
















....










....






















Template Conservation    
   
   

  

 
 
        
  
                          
 

 
  
     
       
Template Sequence  RGQVSVNISKPGITKGNHWHHTKNEKFLVVSGKGVIRFRHVNDDEIIEYYVSGDKLEVVDIPVGYTHNIENLGDTDMVTI
Template Known Secondary structure  S

TT

SS

STT



TTB


TT
SSS
Template Predicted Secondary structure 

























Template SS confidence 















































































   271........280.........290.........300.........310.........320.........330.........340.........350
 
   98.
Predicted Secondary structure 
Query SS confidence 

Query Sequence  VF
Query Conservation    
Alig confidence 

Template Conservation    
Template Sequence  MW
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 

   351.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions