 |
Job Description | P77396 | Confidence | 97.09% | Date | Thu Jan 5 12:28:33 GMT 2012 |
Rank | 79 | Aligned Residues | 93 |
% Identity | 19% | Template | c2opkC_ |
PDB info |
PDB header:isomerase | Chain: C: PDB Molecule:hypothetical protein; |
PDBTitle: crystal structure of a putative mannose-6-phosphate isomerase2 (reut_a1446) from ralstonia eutropha jmp134 at 2.10 a resolution
|
Resolution | 2.10 Å |
|
 |
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | |
|
. | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  | . | . |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | G | L | P | A | D | Q | Q | F | F | A | D | L | F | S | G | L | V | L | N | P | Q | L | L | G | R | V | W | F | A | S | Q | P | A | S | L | P | V | G | S | L | C | I | D | F | P | R | L | D | I | V | L | R | G | E | Y | G | N | L | L | E | A | K | . |
. |
Q | Q | R | L | V | E | G | E | M | L | F | I | P | A | R |
Query Conservation |   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   | . | . |   |   |   |
|   |   |
|   |
|   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|   |
|
|   |
|   |   |   |   |   |   |   |
|
|
|
|
|
|   |
|
|   |
|
|   |   |   |
|
|
|
|   |   |
| . | . | . | . |
|
|
|   |
|
|   |
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |
|
|   |
|   |
|
|
|
|
Template Sequence |   |
V | P | V | G | A | P | D | E | I | F | Q | P | L | L | E | R | K | G | L | K | I | E | R | I | I | S | N | G | Q | A | S | P | P | G | F | W | Y | D | S | P | Q | D | . |
. |
. |
. |
E | W | V | X | V | V | S | G | S | A | G | I | E | C | E | G | D | T | A | P | R | V | X | R | P | G | D | W | L | H | V | P | A | H |
Template Known Secondary structure |   |
|
| T | T |
| S | S |
|  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  | S | S |
|
|
|
| T | T |
|
| B |
|
| S | S |  | . | . | . | . |  |  |  |  |  |  |  | S |
|  |  |  |  |  | T | T |
| S | S |
|  |  |  |
| T | T |
|  |  |  |  |
| T | T |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
| . | . | . | . |  |  |  |  |  |  |  |
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | |
|
|
|
. | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . |
  |
  |   |
82 | . | . | . | . | . | . | . | 90 | |
|
|
. | . | . | . | . | . | . | . | . | 100 |
Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
| . | . | . |
|
|  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | A | N | L | P | V | N | N | K | . |
. |
. |
P | V | M | L | L | S | L | V | F | A |
Query Conservation |   |
  |   |   |   |   |   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|   |   |
|
|   |   |   |   |
|
|
|
|
|
|
|   |
|
Template Sequence |   |
C | R | H | R | V | A | W | T | D | G | G | E | P | T | V | W | L | A | V | H | C | D |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |
| S | S | S |
|  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
88 | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|