Job Description P77396 Confidence 57.70% Date Thu Jan 5 12:28:33 GMT 2012 Rank 494 Aligned Residues 155 % Identity 9% Template c2gauA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator, crp/fnr family; PDBTitle: crystal structure of transcriptional regulator, crp/fnr family from2 porphyromonas gingivalis (apc80792), structural genomics, mcsg Resolution 1.90 Å

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		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.					.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.
Query SS confidence																	.	.	.	.
Query Sequence		G	N	L	L	E	A	K	Q	Q	R	L	V	E	G	E	.	.	.	.	M	L	F	I	P	A	R	A	A	N	L	P	V	N	N	K	P	V	M	L	L	S	L	V	F	A	P	T	W	L	G	L	S	F	Y	D	S	R	T	T	S	L	L	H	P	A	R	Q	I	Q	L	P	S	L	Q	R	G	E	G	E	A
Query Conservation																	.	.	.	.
Alig confidence																	.	.	.	.
Template Conservation
Template Sequence		P	F	P	C	K	K	A	S	T	V	F	S	E	G	D	I	P	N	N	L	F	Y	L	Y	E	G	K	I	K	I	L	R	R	F	H	I	S	R	I	V	K	P	G	Q	F	F	G	M	R	P	Y	F	A	E	E	T	C	S	S	T	A	I	A	V	E	N	S	K	V	L	A	I	P	V	E	A	I	E	A	L
Template Known Secondary structure							T	T						T	T												S																T	T				S							T	S			S	S					S	S
Template Predicted Secondary structure
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.						.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																																																															.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.
Query Sequence		M	L	T	A	L	T	H	L	S	R	S	P	L	E	Q	N	I	I	Q	P	L	V	L	S	L	L	H	L	C	R	S	V	V	N	M	P	P	G	N	S	Q	P	R	G	D	F	L	Y	H	S	I	C	N	W	V	Q	D	N	Y	A	Q	.	.	.	.	.	P	L	T	R	E	S	V	A	Q	F	F	N	I	T
Query Conservation																																																															.	.	.	.	.
Alig confidence										.	.	.	.	.	.																																																.	.	.	.	.
Template Conservation										.	.	.	.	.	.
Template Sequence		L	K	G	N	T	S	F	C	.	.	.	.	.	.	R	Y	F	L	K	A	L	A	K	E	L	G	Y	A	E	R	R	T	V	T	L	T	Q	K	H	V	R	G	R	L	A	E	T	L	L	I	L	K	E	N	F	G	F	E	N	D	G	A	T	L	S	I	Y	L	S	R	E	E	L	A	T	L	S	N	M	T
Template Known Secondary structure										.	.	.	.	.	.																								S																			B		T	T	S	S	B	B	S												T	T	S
Template Predicted Secondary structure										.	.	.	.	.	.
Template SS confidence
		120	.	.	.	.	.	.	.							.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		211	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		P	N	H	L	S	K	L	F	A	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	S	N	A	I	R	T	L	S	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		194	.	.	.	.	.	200	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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