Return to main results Retrieve Phyre Job Id

Job DescriptionP69783
Confidence37.35%DateThu Jan 5 12:11:51 GMT 2012
Rank92Aligned Residues51
% Identity12%Templated2ba0a1
SCOP infoOB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   64.....70.........80.........90.........100.........110......
Predicted Secondary structure 

















Query SS confidence 




















































Query Sequence  VDGTIGKIFETNHAFSIESDSGVELFVHFGIDTVELKGEGFKRIAEEGQRVKV
Query Conservation    
 
  
  
 


 
 
  
 










 
 
 

   
  

 
  
Alig confidence 









..








































Template Conservation 
 
 
  
  .. 
  
 
     
 
   

              


 
  
Template Sequence  VIGIIREVAA. . NGWAVDIYSPYQAFLPVSENPEMKPNKKPNEVLDIGDAIIA
Template Known Secondary structure 
S..S
SSSS
GGG
TT

TTS
GGGT

TT
Template Predicted Secondary structure 

..



















Template SS confidence 




















































   61........70 .........80.........90.........100.........110.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions