Return to main results Retrieve Phyre Job Id

Job DescriptionP69783
Confidence100.00%DateThu Jan 5 12:11:51 GMT 2012
Rank1Aligned Residues161
% Identity98%Templated1glaf_
SCOP infoBarrel-sandwich hybrid Duplicated hybrid motif Glucose permease-like
Resolution2.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  GLFDKLKSLVSDDKKDTGTIEIIAPLSGEIVNIEDVPDVVFAEKIVGDGIAIKPTGNKMVAPVDGTIGKIFETNHAFSIE
Query Conservation 


   
      
       
 

  
 

 
  
 
 


   

 
 

 
    
 

  
 
  
  
 


 
 
Alig confidence 





.......


































































Template Conservation 


   .......
       
 

  
 

 
  
 
 


   

 
 

 
    
 

 

 
  
  
 


 
 
Template Sequence  GLFDKL. . . . . . . KSLVSTIEIIAPLSGEIVNIEDVPDVVFAEKIVGDGIAIKPTGNKMVAPVDGTIGKIFETNHAFSIE
Template Known Secondary structure 


TTS.......






SS

GGGSSSTSSS

SS
SSS
TTSS
Template Predicted Secondary structure 



.......


























Template SS confidence 















































































   1..... ...10.........20.........30.........40.........50.........60.........70...
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  SDSGVELFVHFGIDTVELKGEGFKRIAEEGQRVKVGDTVIEFDLPLLEEKAKSTLTPVVISNMDEIKELIKLSGSVTVGE
Query Conservation 
  
 










 
 
 

   
  

 
  
  
   
   
   
      


 
             
  
 
Alig confidence 















































































Template Conservation 
  
 










 
 
 

   
  

 
  
  
   
   
   
      


 
             
  
 
Template Sequence  SDSGVELFVHFGIDTVELKGEGFKRIAEEGQRVKVGDTVIEFDLPLLEEKAKSTLTPVVISNMDEIKELIKLSGSVTVGE
Template Known Secondary structure  TTS

SBSGGGGTTTT
S
TT

TT

SSB



S
TTS
S

S
TTT
Template Predicted Secondary structure 





























Template SS confidence 















































































   81........90.........100.........110.........120.........130.........140.........150.........160
 
   162.......
Predicted Secondary structure 
Query SS confidence 







Query Sequence  TPVIRIKK
Query Conservation    
  
 
Alig confidence 







Template Conservation    
  
 
Template Sequence  TPVIRIKK
Template Known Secondary structure  S
Template Predicted Secondary structure 
Template SS confidence 







   161.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions