 |
Job Description | P15640 | Confidence | 83.26% | Date | Wed Jan 25 15:20:39 GMT 2012 |
Rank | 396 | Aligned Residues | 91 |
% Identity | 10% | Template | d1kyqa1 |
SCOP info | NAD(P)-binding Rossmann-fold domains
| NAD(P)-binding Rossmann-fold domains
| Siroheme synthase N-terminal domain-like
|
Resolution | 2.20 |
|
 |
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | K | V | L | V | I | G | N | G | G | R | E | H | A | L | A | W | K | A | A | Q | S | P | L | V | E | T | V | F | V | A | P | G | N | A | G | T | A | L | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | A | L | Q | N | V | A | I | G | V | T | D | I | P | A | L | L | D | F | A | Q | N |
Query Conservation |   |
|
|
|
|
|
|
|   |
|   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|
|
|
|
|   |
|
|   |
|
|
|   |   |
|
|   |   |
|
|   |
|   |
|
|
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |
Template Sequence |   |
K | R | I | L | L | I | G | G | G | E | V | G | L | T | R | L | Y | K | L | X | P | T | G | C | K | L | T | L | V | S | P | D | L | H | K | S | I | I | P | K | F | G | K | F | I | Q | K | R | F | I | N | P | N | W | D | P | T | K | N | E | I | Y | E | Y | I | R | S | D | F | K | D | E | Y | L | D | L | E | N | E | N |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  | S |  |  |  |  |  |  |  |  |  |  | G | G | G | T |
|  |  |  |  |  |  |  |  |  |
| T | T |  |  |  |  |  |
| G | G | G |
|
|  |  |  |
| T | T |
|
| T | T | S |
|
|
| S |  |  |  |
| S | S |
|
| G | G | G | G |
|
| S | S | T | T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
14 | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . |
  |
  |   |
63 | . | . | . | . | . | . | 70 | . | . | . | . | . | |
. | . | . | . | 80 | . | . | . | . | . | . | |
|
|
. | . | . | 90 | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
|
|
|
|  | . |  |  |  |  |  |  |  |  |  |  |  | . | . | . |
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
Query Sequence |   |
E | K | I | D | L | T | I | V | G | P | E | A | P | . |
L | V | K | G | V | V | D | T | F | R | A | . |
. |
. |
A | G | L | K | I |
Query Conservation |   |
  |   |   |
|   |
|
|   |   |   |
|   |   | . |   |   |   |   |   |
|   |   |
|   |   | . | . | . |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|
|
|
|
|
|   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |
|
Template Sequence |   |
D | A | W | Y | I | I | X | T | C | I | P | D | H | P | E | S | A | R | I | Y | H | L | C | K | E | R | F | G | K | Q | Q | L | V |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |
|
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | S |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
105 | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|